PDB entry 6zyd

View 6zyd on RCSB PDB site
Description: ynai
Deposited on 2020-07-31, released 2020-11-25
The last revision was dated 2020-11-25, with a file datestamp of 2020-11-20.
Experiment type: EM
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Low conductance mechanosensitive channel YnaI,Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZYD (Start-67)
    • Uniprot P0AEB5
  • Chain 'B':
    Compound: Low conductance mechanosensitive channel YnaI,Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZYD (Start-67)
    • Uniprot P0AEB5
  • Chain 'C':
    Compound: Low conductance mechanosensitive channel YnaI,Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZYD (Start-67)
    • Uniprot P0AEB5
  • Chain 'D':
    Compound: Low conductance mechanosensitive channel YnaI,Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZYD (Start-67)
    • Uniprot P0AEB5
  • Chain 'E':
    Compound: Low conductance mechanosensitive channel YnaI,Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZYD (Start-67)
    • Uniprot P0AEB5
  • Chain 'F':
    Compound: Low conductance mechanosensitive channel YnaI,Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZYD (Start-67)
    • Uniprot P0AEB5
  • Chain 'G':
    Compound: Low conductance mechanosensitive channel YnaI,Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZYD (Start-67)
    • Uniprot P0AEB5
  • Heterogens: PEE

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6zydA (A:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxmiaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliyti
iisavgsiinyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrdi
tsarimsriikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgim
lyfdrpfsigdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrm
tnrritttiglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvyc
ftkttvwaewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6zydA (A:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxdfictsliaviltiklfllinqfekqqikkgrditsarimsriikitiivvlv
llygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigdwirspdrn
iegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttiglryedaakv
gviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewlaaqqdvyl
kiidivqshgadfafpsqtlymd

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6zydB (B:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxmiaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliyti
iisavgsiinyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrdi
tsarimsriikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgim
lyfdrpfsigdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrm
tnrritttiglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvyc
ftkttvwaewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6zydB (B:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxdfictsliaviltiklfllinqfekqqikkgrditsarimsriikitiivvlv
llygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigdwirspdrn
iegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttiglryedaakv
gviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewlaaqqdvyl
kiidivqshgadfafpsqtlymd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6zydC (C:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxmiaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliyti
iisavgsiinyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrdi
tsarimsriikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgim
lyfdrpfsigdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrm
tnrritttiglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvyc
ftkttvwaewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6zydC (C:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxdfictsliaviltiklfllinqfekqqikkgrditsarimsriikitiivvlv
llygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigdwirspdrn
iegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttiglryedaakv
gviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewlaaqqdvyl
kiidivqshgadfafpsqtlymd

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6zydD (D:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxmiaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliyti
iisavgsiinyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrdi
tsarimsriikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgim
lyfdrpfsigdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrm
tnrritttiglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvyc
ftkttvwaewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6zydD (D:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxdfictsliaviltiklfllinqfekqqikkgrditsarimsriikitiivvlv
llygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigdwirspdrn
iegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttiglryedaakv
gviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewlaaqqdvyl
kiidivqshgadfafpsqtlymd

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6zydE (E:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxmiaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliyti
iisavgsiinyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrdi
tsarimsriikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgim
lyfdrpfsigdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrm
tnrritttiglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvyc
ftkttvwaewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6zydE (E:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxdfictsliaviltiklfllinqfekqqikkgrditsarimsriikitiivvlv
llygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigdwirspdrn
iegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttiglryedaakv
gviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewlaaqqdvyl
kiidivqshgadfafpsqtlymd

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6zydF (F:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxmiaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliyti
iisavgsiinyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrdi
tsarimsriikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgim
lyfdrpfsigdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrm
tnrritttiglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvyc
ftkttvwaewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6zydF (F:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxdfictsliaviltiklfllinqfekqqikkgrditsarimsriikitiivvlv
llygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigdwirspdrn
iegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttiglryedaakv
gviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewlaaqqdvyl
kiidivqshgadfafpsqtlymd

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6zydG (G:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxmiaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliyti
iisavgsiinyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrdi
tsarimsriikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgim
lyfdrpfsigdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrm
tnrritttiglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvyc
ftkttvwaewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgrlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6zydG (G:)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxdfictsliaviltiklfllinqfekqqikkgrditsarimsriikitiivvlv
llygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigdwirspdrn
iegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttiglryedaakv
gviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewlaaqqdvyl
kiidivqshgadfafpsqtlymd