PDB entry 6zuk

View 6zuk on RCSB PDB site
Description: crystal structure of dimethylated rsl-n23h/g68h (rsl-b6) in complex with cucurbit[7]uril and zinc
Deposited on 2020-07-23, released 2020-11-25
The last revision was dated 2020-11-25, with a file datestamp of 2020-11-20.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: E7Z57_08365, RSP795_21825, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (1-87)
      • expression tag (0)
      • engineered mutation (21)
      • engineered mutation (58)
      • engineered mutation (65-67)
      • conflict (68)
  • Chain 'B':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: E7Z57_08365, RSP795_21825, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (1-87)
      • expression tag (0)
      • engineered mutation (21)
      • engineered mutation (58)
      • engineered mutation (65-67)
      • conflict (68)
  • Chain 'C':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: E7Z57_08365, RSP795_21825, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (1-87)
      • expression tag (0)
      • engineered mutation (21)
      • engineered mutation (58)
      • engineered mutation (65-67)
      • conflict (68)
  • Chain 'D':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: E7Z57_08365, RSP795_21825, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (1-87)
      • engineered mutation (21)
      • engineered mutation (58)
      • engineered mutation (65-67)
      • conflict (68)
  • Chain 'E':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: E7Z57_08365, RSP795_21825, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (1-87)
      • engineered mutation (21)
      • engineered mutation (58)
      • engineered mutation (65-67)
      • conflict (68)
  • Chain 'F':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: E7Z57_08365, RSP795_21825, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (1-87)
      • engineered mutation (21)
      • engineered mutation (58)
      • engineered mutation (65-67)
      • conflict (68)
  • Heterogens: QQ7, MLY, ZN, GOL, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6zukA (A:)
xvqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisi
rvyasnhgkttewcwdgngwtkgaytat

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6zukB (B:)
xvqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisi
rvyasnhgkttewcwdgngwtkgaytat

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6zukC (C:)
xvqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisi
rvyasnhgkttewcwdgngwtkgaytat

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6zukD (D:)
xvqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisi
rvyasnhgkttewcwdgngwtkgaytat

    Sequence, based on observed residues (ATOM records):
    >6zukD (D:)
vqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisir
vyasnhgkttewcwdgngwtkgaytat

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6zukE (E:)
xvqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisi
rvyasnhgkttewcwdgngwtkgaytat

    Sequence, based on observed residues (ATOM records):
    >6zukE (E:)
vqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisir
vyasnhgkttewcwdgngwtkgaytat

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6zukF (F:)
xvqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisi
rvyasnhgkttewcwdgngwtkgaytat

    Sequence, based on observed residues (ATOM records):
    >6zukF (F:)
vqtaatswgtvpsirvytanhgkitercwdgkgwytgafnepgdnvsvtswlvgsaisir
vyasnhgkttewcwdgngwtkgaytat