PDB entry 6ztz

View 6ztz on RCSB PDB site
Description: assembly intermediates of orthoreovirus captured in the cell
Deposited on 2020-07-20, released 2020-09-16
The last revision was dated 2020-09-16, with a file datestamp of 2020-09-11.
Experiment type: EM
Resolution: N/A
R-factor: N/A
AEROSPACI score: -0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: Inner capsid protein lambda-1
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Inner capsid protein lambda-1
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Inner capsid protein sigma-2
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Outer capsid protein mu-1
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11077 (0-640)
      • conflict (309)
      • conflict (324)
  • Chain 'L':
    Compound: Outer capsid protein mu-1
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11077 (0-640)
      • conflict (309)
      • conflict (324)
  • Chain 'M':
    Compound: Outer capsid protein mu-1
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11077 (0-640)
      • conflict (309)
      • conflict (324)
  • Chain 'O':
    Compound: Outer capsid protein lambda-2
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: Inner capsid protein sigma-2
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
  • Chain 'X':
    Compound: Outer capsid protein sigma-3
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P07939 (0-364)
      • conflict (103)
      • conflict (324)
  • Chain 'Y':
    Compound: Outer capsid protein sigma-3
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P07939 (0-364)
      • conflict (103)
      • conflict (324)
  • Chain 'Z':
    Compound: Outer capsid protein sigma-3
    Species: Reovirus sp. [TaxId:10891]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P07939 (0-364)
      • conflict (103)
      • conflict (324)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzB (B:)
    nkktaqllhadtprlvtwdaglctsfkivpivpaqvpqdvlaytfftssyaiqspfpeaa
    vsrivvhtrwasnvdfdrdssvimapptennihlfkqllntetlsvrganplmfranvlh
    mllefvldnlylnrhtgfsqdhtpfteganlrslpgpdaekwysimyptrmgtpnvskic
    nfvascvrnrvgrfdraqmmngamsewvdvfetsdaltvsirgrwmarlarmninpteie
    waltecaqgyvtvtspyapsvnrlmpyrisnaerqisqiirimnignnatviqpvlqdis
    vllqrisplqidptiisntmstvsesttqtlspassilgklrpsnsdfssfrvalagwly
    ngvvttviddssypkdggsvtslenlwdffilalalplttdpcapvkafmtlanmmvgfe
    tipmdnqiytqsrrasafstphtwprcfmniqlispidapilrqwaeiihrywpnpsqir
    ygapnvfgsanlftppevlllpidhqpanvttptldftneltnwrarvcelmknlvdnqr
    yqpgwtqslvssmrgtldklkliksmtpmylqqlapvelaviapmlpfppfqvpyvrldr
    drvptmvgvtrqsrdtitqpalslsttnttvgvplaldaraitvallsgkyppdlvtnvw
    yadaiypmyadtevfsnlqrdmitceavqtlvtlvaqisetqypvdryldwipslrasaa
    taatfaewvntsmktafdlsdmllepllsgdprmtqlaiqyqqyngrtfnvipempgsvi
    adcvqltaevfnheynlfgiargdiiigrvqsthlwsplapppdlvfdrdtpgvhifgrd
    crisfgmngaapmirdetgmmvpfegnwifplalwqmntryfnqqfdawiktgelririe
    mgaypymlhyydprqyanawnltsawleeitptsipsvpfmvpissdhdissapavqyii
    steyndrslfctnssspqtiagpdkhipveryniltnpdapptqiqlpevvdlynvvtry
    ayetppitavvmgvp
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzC (C:)
    aglctsfkivpivpaqvpqdvlaytfftssyaiqspfpeaavsrivvhtrwasnvdfdrd
    ssvimapptennihlfkqllntetlsvrganplmfranvlhmllefvldnlylnrhtgfs
    qdhtpfteganlrslpgpdaekwysimyptrmgtpnvskicnfvascvrnrvgrfdraqm
    mngamsewvdvfetsdaltvsirgrwmarlarmninpteiewaltecaqgyvtvtspyap
    svnrlmpyrisnaerqisqiirimnignnatviqpvlqdisvllqrisplqidptiisnt
    mstlspassilgklrpsnsdfssfrvalagwlyngvvttviddssypkdggsvtslenlw
    dffilalalplttdpcapvkafmtlanmmvgfetipmdnqiytqsrrasafstphtwprc
    fmniqlispidapilrqwaeiihrywpnpsqirygapnvfgsanlftppevlllpidhqp
    anvttptldftneltnwrarvcelmknlvdnqryqpgwtqslvssmrgtldklkliksmt
    pmylqqlapvelaviapmlpfppfqvpyvrldrdrvptmvgvtrqsrdtitqpalslstt
    nttvgvplaldaraitvallsgkyppdlvtnvwyadaiypmyadtevfsnlqrdmitcea
    vqtlvtlvaqisetqypvdryldwipslrasaataatfaewvntsmktafdlsdmllepl
    lsgdprmtqlaiqyqqyngrtfnvipempgsviadcvqltaevfnheynlfgiargdiii
    grvqsthlwsplapppdlvfdrdtpgvhifgrdcrisfgmngaapmirdetgmmvpfegn
    wifplalwqmntryfnqqfdawiktgelririemgaypymlhyydprqyanawnltsawl
    eeitptsipsvpfmvpissdhdissapavqyiisteyndrslfctnssspqtiagpdkhi
    pveryniltnpdapptqiqlpevvdlynvvtryayetppitavvmgvp
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzD (D:)
    araaflfktvgfgglqnvpindelsshllragnspwqltqfldwislgrglatsalvpta
    gsryyqmscllsgtlqipfrpnhrwgdirflrlvwsaptldglvvappqvlaqpalqaqa
    drvydcddypflardprfkhrvyqqlsavtllnltgfgpisyvrvdedmwsgdvnqllmn
    yfghtfaeiaytlcqasanrpwehdgtyarmtqiilslfwlsyvgvihqqntyrtfyfqc
    nrrgdaaevwilscslnhsaqirpgnrslfvmptspdwnmdvnlilsstltgclcsgsql
    plidnnsvpavsrnihgwtgragnqlhgfqvrrmvtefcdrlrrdgvmtqaqqnqieala
    dqtqqfkrdkleawareddqynqanpnstmfrtkpftnaqwgrgntgatsaaiaali
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzK (K:)
    tinvtgdgnvfkpsaetsstavpslslspgmlnpggvpwiaigdetsvtspgalrrmtsk
    dideplvvvtehaianftkaemalefnrefldklrvlsvspkysdlltyvdcyvgvsarq
    alnnfqkqvpvitptrqtmyvdsiqaalkalekweidlrvaqtllptnvpigevscpmqs
    vvkllddqlpddslirrypkeaavalakrnggiqwmdvsegtvmneavnavaasalapsa
    sappleeksklteqamdlvtaaepeiiaslvpvpapvfaippkpadynvrtlkideatwl
    rmipktmgtlfqiqvtdntgtnwhfnlrggtrvvnldqiapmrfvldlggksyketswdp
    ngkkvgfivfqskipfelwtaasqigqatvvnyvqlyaedssftaqsiiattslaynyep
    eqlnktdpemnyyllatfidsaaitptnmtqpdvwdalltmsplsagevtvkgavvsevv
    paeligsytpeslnaslpndaarcmidraskiaeaikidddagpdeyspnsvpiqgqlai
    sqletgygvrifnpkgilskiasramqafigdpstiitqaapvlsdknnwialaqgvkts
    lrtkslsagvktavsklsssesiqnwtqgfldkvsthfpap
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzL (L:)
    tinvtgdgnvfkpsaetsstavpslslspgmlnpggvpwiaigdetsvtspgalrrmtsk
    dideplvvvtehaianftkaemalefnrefldklrvlsvspkysdlltyvdcyvgvsarq
    alnnfqkqvpvitptrqtmyvdsiqaalkalekweidlrvaqtllptnvpigevscpmqs
    vvkllddqlpddslirrypkeaavalakrnggiqwmdvsegtvmneavnavaasalapsa
    sappleeksklteqamdlvtaaepeiiaslvpvpapvfaippkpadynvrtlkideatwl
    rmipktmgtlfqiqvtdntgtnwhfnlrggtrvvnldqiapmrfvldlggksyketswdp
    ngkkvgfivfqskipfelwtaasqigqatvvnyvqlyaedssftaqsiiattslaynyep
    eqlnktdpemnyyllatfidsaaitptnmtqpdvwdalltmsplsagevtvkgavvsevv
    paeligsytpeslnaslpndaarcmidraskiaeaikidddagpdeyspnsvpiqgqlai
    sqletgygvrifnpkgilskiasramqafigdpstiitqaapvlsdknnwialaqgvkts
    lrtkslsagvktavsklsssesiqnwtqgfldkvsthfpap
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzM (M:)
    tinvtgdgnvfkpsaetsstavpslslspgmlnpggvpwiaigdetsvtspgalrrmtsk
    dideplvvvtehaianftkaemalefnrefldklrvlsvspkysdlltyvdcyvgvsarq
    alnnfqkqvpvitptrqtmyvdsiqaalkalekweidlrvaqtllptnvpigevscpmqs
    vvkllddqlpddslirrypkeaavalakrnggiqwmdvsegtvmneavnavaasalapsa
    sappleeksklteqamdlvtaaepeiiaslvpvpapvfaippkpadynvrtlkideatwl
    rmipktmgtlfqiqvtdntgtnwhfnlrggtrvvnldqiapmrfvldlggksyketswdp
    ngkkvgfivfqskipfelwtaasqigqatvvnyvqlyaedssftaqsiiattslaynyep
    eqlnktdpemnyyllatfidsaaitptnmtqpdvwdalltmsplsagevtvkgavvsevv
    paeligsytpeslnaslpndaarcmidraskiaeaikidddagpdeyspnsvpiqgqlai
    sqletgygvrifnpkgilskiasramqafigdpstiitqaapvlsdknnwialaqgvkts
    lrtkslsagvktavsklsssesiqnwtqgfldkvsthfpap
    

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzO (O:)
    anvwgvrladslssptietrtrqytlhdlcsdldanpgrepwkplrnqrtnnivavqlfr
    plqglvldtqlygfpgafddwerfmreklrvlkyevlriypisnysnehvnvfvanalvg
    aflsnqafydllplliindtmigdllgtgaslsqffqshgdvlevaagrkylqmenysnd
    dddpplfakdlsdyakafysdtyevldrffwthdssagvlvhydkptnghhyllgtltqm
    vsappyiinatdamllescleqfsanvrarpaqpvtrldqcyhlrwgaqyvgedsltyrl
    gvlsllatngyqlarpiprqltnrwlssfvsqimsdgvnetplwpqeryvqiaydspsvv
    dgatqygyvrknqlrlgmrisalqslsdtpspvqwlpqytidqaamdegdlmvsrltqlp
    lrpdygniwvgdalsyyvdynrshrvvlsselpqlpdtyfdgdeqygrslfslarkigdr
    slvkdtavlkhayqaidpntgkeylrsrqsvayfgasaghsgadqplviepwiqgkisgv
    pppssvrqfgydvargaivdlarpfpsgdyqfvysdvdqvvdghddlsissglvesllss
    cmhatapggsfvvkinfptrpvwhyieqkilpnitsymlikpfvtnnvelffvafgvhqh
    ssltwtsgvyfflvdhfyryetlstisrqlpsfgyvddgssvtgietisienpgfsnmtq
    aarigisglcanvgnarksiaiyeshgarvltitsrrspasarrksrlrylplidprsle
    vqartilpadpvlfenvsgasphvcltmmynfevssavydgdvvldlgtgpeakilelip
    atspvtcvdirptaqpsgcwnvrttfleldylsdgwitgvrgdivtcmlslgaaaagksm
    tfdaafqqlikvlskstanvvlvqvncptdvvrsikgyleidstnkryrfpkfgrdepys
    dmdalekicrtawpncsitwvplsydlrwtrlallesttlssasiriaelmykympimri
    dihglpmekrgnfivgqncslvipgfnaqdvfncyfnsalafstedvnaamipqvsaqfd
    atkgewtldmvfsdagiytmqalvgsnanpvslgsfvvdspdvditdawpaqldftiagt
    dvditvnpyyrlmtfvridgqwqianpdkfqffstlvmnvkldiadkyllyyirdvqsrd
    vgfyiqhplqllntitlptnedlflsapdmrewavkesgnticilnsqgfvlpqdwdvlt
    dtiswspsiptyivppgdytltpl
    

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzP (P:)
    araaflfktvgfgglqnvpindelsshllragnspwqltqfldwislgrglatsalvpta
    gsryyqmscllsgtlqipfrpnhrwgdirflrlvwsaptldglvvappqvlaqpalqaqa
    drvydcddypflardprfkhrvyqqlsavtllnltgfgpisyvrvdedmwsgdvnqllmn
    yfghtfaeiaytlcqasanrpwehdgtyarmtqiilslfwlsyvgvihqqntyrtfyfqc
    nrrgdaaevwilscslnhsaqirpgnrslfvmptspdwnmdvnlilsstltgclcsgsql
    plidnnsvpavsrnihgwtgragnqlhgfqvrrmvtefcdrlrrdgvmtqaqqnqieala
    dqtqqfkrdkleawareddqynqanpnstmfrtkpftnaqwgrgntgatsaaiaali
    

  • Chain 'X':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzX (X:)
    mevclpnghqivdlinnafegrvsiysaqegwdktisaqpdmmvcggavvcmhclgvvgs
    lqrklkhlphhrcnqqirhqdyvdvqfadrvtahwkrgmlsfvcqmhammndvspedldr
    vrteggslvelnwlqvdpnsmfrsihsswtdplqvvddldtkldqywtalnlmidssdlv
    pnfmmrdpshafngvrlegdarqtqfsrtfdsrsslewgvmvydyselehdpskgrayrk
    elvtpardfghfglshysrattpilgkmpavfsgmltgnckmypfikgtaklktvrklvd
    svnhawgvekiryalgpggmtgwynrtmqqapivltpaaltmfsdttkfgdldypvmigd
    pmilg
    

  • Chain 'Y':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzY (Y:)
    mevclpnghqivdlinnafegrvsiysaqegwdktisaqpdmmvcggavvcmhclgvvgs
    lqrklkhlphhrcnqqirhqdyvdvqfadrvtahwkrgmlsfvcqmhammndvspedldr
    vrteggslvelnwlqvdpnsmfrsihsswtdplqvvddldtkldqywtalnlmidssdlv
    pnfmmrdpshafngvrlegdarqtqfsrtfdsrsslewgvmvydyselehdpskgrayrk
    elvtpardfghfglshysrattpilgkmpavfsgmltgnckmypfikgtaklktvrklvd
    svnhawgvekiryalgpggmtgwynrtmqqapivltpaaltmfsdttkfgdldypvmigd
    pmilg
    

  • Chain 'Z':
    Sequence; same for both SEQRES and ATOM records:
    >6ztzZ (Z:)
    mevclpnghqivdlinnafegrvsiysaqegwdktisaqpdmmvcggavvcmhclgvvgs
    lqrklkhlphhrcnqqirhqdyvdvqfadrvtahwkrgmlsfvcqmhammndvspedldr
    vrteggslvelnwlqvdpnsmfrsihsswtdplqvvddldtkldqywtalnlmidssdlv
    pnfmmrdpshafngvrlegdarqtqfsrtfdsrsslewgvmvydyselehdpskgrayrk
    elvtpardfghfglshysrattpilgkmpavfsgmltgnckmypfikgtaklktvrklvd
    svnhawgvekiryalgpggmtgwynrtmqqapivltpaaltmfsdttkfgdldypvmigd
    pmilg