PDB entry 6zno

View 6zno on RCSB PDB site
Description: the pointed end complex of dynactin with the p150 projection docked
Deposited on 2020-07-06, released 2020-07-29
The last revision was dated 2021-04-28, with a file datestamp of 2021-04-23.
Experiment type: EM
Resolution: 6.8 Å
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'G':
    Compound: ARP1 actin related protein 1 homolog A
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Actin, cytoplasmic 1
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: ARP1 actin related protein 1 homolog A
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Arp11
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: dynactin subunit 2
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'U':
    Compound: dynactin 6
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'V':
    Compound: Dynactin subunit 5
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Y':
    Compound: Dynactin Subunit 4
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Z':
    Compound: Dynactin subunit 1
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZNO (0-188)
  • Chain 'z':
    Compound: Dynactin subunit 1
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZNO (0-187)
  • Heterogens: ADP, ATP, ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6znoG (G:)
    mesydvianqpvvidngsgvikagfagdqipkycfpnyvgrpkhvrvmagalegdifigp
    kaeehrgllsirypmehgivkdwndmeriwqyvyskdqlqtfseehpvllteaplnprkn
    reraaevffetfnvpalfismqavlslyatgrttgvvldsgdgvthavpiyegfamphsi
    mridiagrdvsrflrlylrkegydfhsssefeivkaikeracylsinpqkdetletekaq
    yylpdgstieigpsrfrapellfrpdligeesegihevlvfaiqksdmdlrrtlfsnivl
    sggstlfkgfgdrllsevkklapkdvkirisapqerlystwiggsilasldtfkkmwvsk
    keyeedgarsihrktf
    

    Sequence, based on observed residues (ATOM records):
    >6znoG (G:)
    ianqpvvidngsgvikagfagdqipkycfpnyvgrpkhvrvmagalegdifigpkaeehr
    gllsirypmehgivkdwndmeriwqyvyskdqlqtfseehpvllteaplnprknreraae
    vffetfnvpalfismqavlslyatgrttgvvldsgdgvthavpiyegfamphsimridia
    grdvsrflrlylrkegydfhsssefeivkaikeracylsinpqkdetletekaqyylpdg
    stieigpsrfrapellfrpdligeesegihevlvfaiqksdmdlrrtlfsnivlsggstl
    fkgfgdrllsevkklapkdvkirisapqerlystwiggsilasldtfkkmwvskkeyeed
    garsihrktf
    

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6znoH (H:)
    mdddiaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaqs
    krgiltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmt
    qimfetfntpamyvaiqavlslyasgrttgivmdsgdgvthtvpiyegyalphailrldl
    agrdltdylmkiltergysftttaereivrdikeklcyvaldfeqemataassssleksy
    elpdgqvitignerfrcpealfqpsflgmescgihettfnsimkcdvdirkdlyantvls
    ggttmypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslstfqqmwiskq
    eydesgpsivhrkcf
    

    Sequence, based on observed residues (ATOM records):
    >6znoH (H:)
    aalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaqskrgil
    tlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqimfe
    tfntpamyvaiqavlslyasgrttgivmdsgdgvthtvpiyegyalphailrldlagrdl
    tdylmkiltergysftttaereivrdikeklcyvaldfeqemataassssleksyelpdg
    qvitignerfrcpealfqpsflgmescgihettfnsimkcdvdirkdlyantvlsggttm
    ypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslstfqqmwiskqeydes
    gpsivhrkcf
    

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6znoI (I:)
    mesydvianqpvvidngsgvikagfagdqipkycfpnyvgrpkhvrvmagalegdifigp
    kaeehrgllsirypmehgivkdwndmeriwqyvyskdqlqtfseehpvllteaplnprkn
    reraaevffetfnvpalfismqavlslyatgrttgvvldsgdgvthavpiyegfamphsi
    mridiagrdvsrflrlylrkegydfhsssefeivkaikeracylsinpqkdetletekaq
    yylpdgstieigpsrfrapellfrpdligeesegihevlvfaiqksdmdlrrtlfsnivl
    sggstlfkgfgdrllsevkklapkdvkirisapqerlystwiggsilasldtfkkmwvsk
    keyeedgarsihrktf
    

    Sequence, based on observed residues (ATOM records):
    >6znoI (I:)
    ianqpvvidngsgvikagfagdqipkycfpnyvgrpkhvrvmagalegdifigpkaeehr
    gllsirypmehgivkdwndmeriwqyvyskdqlqtfseehpvllteaplnprknreraae
    vffetfnvpalfismqavlslyatgrttgvvldsgdgvthavpiyegfamphsimridia
    grdvsrflrlylrkegydfhsssefeivkaikeracylsinpqkdetletekaqyylpdg
    stieigpsrfrapellfrpdligeesegihevlvfaiqksdmdlrrtlfsnivlsggstl
    fkgfgdrllsevkklapkdvkirisapqerlystwiggsilasldtfkkmwvskkeyeed
    garsihrktf
    

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6znoJ (J:)
    mplyeglgsggektavvidlgeaftkcgfagetgprciipsvikkagmpkpikvvqynin
    teelysylkefihilyfrhllvnprdrrvvviesvlcpshfretltrvlfkyfevpsvll
    apshlmalltlginsamvldcgyreslvlpiyegipvlncwgalplggkalhkeletqll
    eqctvdtgaakeqslpsvmgsipegvledikvrtcfvsdltrglkiqaakfnidgnterp
    spppnvdypldgekilhvlgsirdsvveilfeqdneeksvatlildslmqcpidtrkqla
    enlviiggtsmlpgflhrllaeirylvekpkykktlgtktfrihtppakancvawlggai
    fgalqdilgsrsvskeyynqtgripdwcslnnpplemvfdvgksqpplmkrafstek
    

    Sequence, based on observed residues (ATOM records):
    >6znoJ (J:)
    ektavvidlgeaftkcgfagetgprciipsvikkagmpkpikvvqyninteelysylkef
    ihilyfrhllvnprdrrvvviesvlcpshfretltrvlfkyfevpsvllapshlmalltl
    ginsamvldcgyreslvlpiyegipvlncwgalplggkalhkeletqlleqctvdtgaak
    eqslpsvmgsipegvledikvrtcfvsdltrglkiqaakfnidgnterpspppnvdypld
    gekilhvlgsirdsvveilfeqdneeksvatlildslmqcpidtrkqlaenlviiggtsm
    lpgflhrllaeirylvekpkykktlgtktfrihtppakancvawlggaifgalqdilgsr
    svskeyynqtgripdwcsl
    

  • Chain 'M':
    Sequence, based on SEQRES records:
    >6znoM (M:)
    madpkyadlpgiarnepdvyetsdlpeddqaefdaeleeltstsvehiivnpnaaydkfk
    dkrvgtkgldfsdrigktkrtgyesgeyemlgeglgvketpqqkyqrllhevqeltteve
    kikmtvkesateekltpvvlakqlaalkqqlvashlekllgpdaainltdpdgalakrll
    lqleatkntkgagsggkttsgsppdsslvtyelhsrpeqdkfsqaakvaelekrltelea
    tvrcdqdaqnplsaglqgaclmetvellqakvsaldlavldqvearlqsvlgkvneiakh
    kasvedadtqskvhqlyetiqrwspiastlpelvqrlvtikqlheqamqfgqllthldtt
    qqmiacslkdnatlltqvqttmrenlstvegnfanidermkklgk
    

    Sequence, based on observed residues (ATOM records):
    >6znoM (M:)
    dpkyadlpgiarnepdvyetsdlpleeltstsvehiivnpnaaydkfkdkrvgtkgldfs
    drigktkrtgyesge
    

  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records:
    >6znoU (U:)
    svkiapgavvcveseirgdvtigprtvihpkariiaeagpivigegnlieeqaliinahp
    dnitpdaedsepkpmiigtnnvfevgcysqamkmgdnnvieskayvgrnviltsgciiga
    ccnlntfevipentviygadclrrvqterpqpqtlqldflmkilpny
    

  • Chain 'V':
    Sequence, based on SEQRES records:
    >6znoV (V:)
    melgellynkseyietasgnkvsrqsvlcgsqnivlngktivmndciirgdlanvrvgrh
    cvvksrsvirppfkkfskgvaffplhigdhvfieedcvvnaaqigsyvhvgkncvigrrc
    vlkdcckildntvlppetvvppftvfsgcpglfsgelpectqelmidvtksyyqkflplt
    qv
    

    Sequence, based on observed residues (ATOM records):
    >6znoV (V:)
    melgellynkseyietasgnkvsrqsvlcgsqnivlngktivmndciirgdlanvrvgrh
    cvvksrsvirppfkkfskgvaffplhigdhvfieedcvvnaaqigsyvhvgkncvigrrc
    vlkdcckildntvlppetvvppftvfsgcpglfsgelpectqelmidvtksyyqkflpl
    

  • Chain 'Y':
    Sequence, based on SEQRES records:
    >6znoY (Y:)
    masllqservlylvqgekkvraplsqlyfcrycselrslecvshevdshycpsclenmps
    aeaklkknrcancfdcpgcmhtlstratsistqlpddpaktavkkayylacgfcrwtsrd
    vgmadksvasggwqepdhphtqrmnklieyyqqlaqkekverdrkklarrrnymplafsq
    htihvvdkyglgtrlqrpragttitalaglslkegedqkeikiepaqavdeveplpedyy
    trpvnltevttlqqrllqpdfqpicasqlyprhkhllikrslrcrqcehnlskpefnpts
    ikfkiqlvavnyipevrimsipnlrymkesqvlltltnpvenlthvtlleceegdpddtn
    stakvsvpptelvlagkdaaaeydelaepqdfpddpdvvafrkankvgvfikvtpqreeg
    dvtvcfklkhdfknlaapirpveeadpgaevswltqhvelslgpllp
    

    Sequence, based on observed residues (ATOM records):
    >6znoY (Y:)
    asllqservlylvqgekkvraplsqlyfcrycselrslecvshevdshycpsclenmpsa
    eaklkknrcancfdcpgcmhtlstratayylacgfcrwtsrdvgmadksvasggwqepdh
    phtqrmnklieyyqqlaqkekverdrkklarrrnymplafsqhtkeikiepaqavdevep
    lpedyytrpvnltevttlqqrllqpdfqpicasqlyprhkhllikrslrcrqcehnlskp
    efnptsikfkiqlvavnyipevrimsipnlrymkesqvlltltnpvenlthvtlleceeg
    dpddtnstakvsvpptelvlagkdaaaeydelaepqdfpddpdvvafrkankvgvfikvt
    pqreegdvtvcfklkhdfknlaapirpveeadpgaevswltqhvelslgp
    

  • Chain 'Z':
    Sequence; same for both SEQRES and ATOM records:
    >6znoZ (Z:)
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  • Chain 'z':
    Sequence; same for both SEQRES and ATOM records:
    >6znoz (z:)
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