PDB entry 6znk

View 6znk on RCSB PDB site
Description: maeb pta domain n718d mutant
Deposited on 2020-07-06, released 2021-02-17
The last revision was dated 2021-03-17, with a file datestamp of 2021-03-12.
Experiment type: XRAY
Resolution: 3.04 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'B':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'C':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'D':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • expression tag (18-19)
      • engineered mutation (299)
  • Chain 'E':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'F':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'G':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'H':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'I':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'J':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'K':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Chain 'L':
    Compound: malate dehydrogenase
    Species: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [TaxId:264462]
    Gene: mdh, Bd1833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6MM15 (20-End)
      • engineered mutation (299)
  • Heterogens: SO4

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6znkA (A:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkA (A:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6znkB (B:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkB (B:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6znkC (C:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkC (C:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlksr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6znkD (D:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkD (D:)
shskvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgype
rvkekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfa
ammvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvn
lnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdl
miegdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpf
ltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6znkE (E:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkE (E:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6znkF (F:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkF (F:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6znkG (G:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkG (G:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6znkH (H:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkH (H:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6znkI (I:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkI (I:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6znkJ (J:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkJ (J:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6znkK (K:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkK (K:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6znkL (L:)
mgsshhhhhhssglvpagshskvfirsainrvhqnsaanggelprivfpegtstkvlkal
atlveekicqpillgypervkekikaldipllndvsivhpsshpkyfsfveklyslrqrk
ginlgeaerlmadpnyfaammvnqgeadgmvsgssinyadavrpilqtigvykegipagl
nfvlledkflvladttvnlnptaeqcaqialqaakiveyfgieprvamlsysnfsgaegt
prkmkkaaeiarslrpdlmiegdmqadtavnpeimerlfpfsglkgganvlvfpnlessd
iaykliqqigkaevigpfltgvrrsanvlqrtttvdgivnsvvftaleaqyikevlksrg
kk

    Sequence, based on observed residues (ATOM records):
    >6znkL (L:)
skvfirsainrvhqnsaanggelprivfpegtstkvlkalatlveekicqpillgyperv
kekikaldipllndvsivhpsshpkyfsfveklyslrqrkginlgeaerlmadpnyfaam
mvnqgeadgmvsgssinyadavrpilqtigvykegipaglnfvlledkflvladttvnln
ptaeqcaqialqaakiveyfgieprvamlsysnfsgaegtprkmkkaaeiarslrpdlmi
egdmqadtavnpeimerlfpfsglkgganvlvfpnlessdiaykliqqigkaevigpflt
gvrrsanvlqrtttvdgivnsvvftaleaqyikevlks