PDB entry 6zh3

View 6zh3 on RCSB PDB site
Description: cryo-em structure of escrt-iii helical vps24 filaments
Deposited on 2020-06-20, released 2020-08-26
The last revision was dated 2020-09-16, with a file datestamp of 2020-09-11.
Experiment type: EM
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vacuolar protein-sorting-associated protein 24
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: VPS24, DID3, YKL041W, YKL254
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Vacuolar protein-sorting-associated protein 24
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: VPS24, DID3, YKL041W, YKL254
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Vacuolar protein-sorting-associated protein 24
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: VPS24, DID3, YKL041W, YKL254
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Vacuolar protein-sorting-associated protein 24
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: VPS24, DID3, YKL041W, YKL254
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6zh3A (A:)
gshmdyikkaiwgpdpkeqqrrirsvlrkngrniekslreltvlqnktqqlikksakknd
vrtvrlyakelyqinkqydrmytsraqldsvrmkideairmntlsnqmadsaglmrevns
lvrlpqlrntmielekelmksgiisemvddtmesvgdvgeemdeavdeevnkiveqytne
kfknvdqvptvelaaneeeqeipdekvdeeadrmvnemrerlralqn

    Sequence, based on observed residues (ATOM records):
    >6zh3A (A:)
mdyikkaiwgpdpkeqqrrirsvlrkngrniekslreltvlqnktqqlikksakkndvrt
vrlyakelyqinkqydrmytsraqldsvrmkideairmntlsnqmadsaglmrevnslvr
lpqlrntmielekelmksgiisemvddtmesvgdvgeemdeavdeevnki

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6zh3B (B:)
gshmdyikkaiwgpdpkeqqrrirsvlrkngrniekslreltvlqnktqqlikksakknd
vrtvrlyakelyqinkqydrmytsraqldsvrmkideairmntlsnqmadsaglmrevns
lvrlpqlrntmielekelmksgiisemvddtmesvgdvgeemdeavdeevnkiveqytne
kfknvdqvptvelaaneeeqeipdekvdeeadrmvnemrerlralqn

    Sequence, based on observed residues (ATOM records):
    >6zh3B (B:)
mdyikkaiwgpdpkeqqrrirsvlrkngrniekslreltvlqnktqqlikksakkndvrt
vrlyakelyqinkqydrmytsraqldsvrmkideairmntlsnqmadsaglmrevnslvr
lpqlrntmielekelmksgiisemvddtmesvgdvgeemdeavdeevnki

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6zh3C (C:)
gshmdyikkaiwgpdpkeqqrrirsvlrkngrniekslreltvlqnktqqlikksakknd
vrtvrlyakelyqinkqydrmytsraqldsvrmkideairmntlsnqmadsaglmrevns
lvrlpqlrntmielekelmksgiisemvddtmesvgdvgeemdeavdeevnkiveqytne
kfknvdqvptvelaaneeeqeipdekvdeeadrmvnemrerlralqn

    Sequence, based on observed residues (ATOM records):
    >6zh3C (C:)
mdyikkaiwgpdpkeqqrrirsvlrkngrniekslreltvlqnktqqlikksakkndvrt
vrlyakelyqinkqydrmytsraqldsvrmkideairmntlsnqmadsaglmrevnslvr
lpqlrntmielekelmksgiisemvddtmesvgdvgeemdeavdeevnki

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6zh3D (D:)
gshmdyikkaiwgpdpkeqqrrirsvlrkngrniekslreltvlqnktqqlikksakknd
vrtvrlyakelyqinkqydrmytsraqldsvrmkideairmntlsnqmadsaglmrevns
lvrlpqlrntmielekelmksgiisemvddtmesvgdvgeemdeavdeevnkiveqytne
kfknvdqvptvelaaneeeqeipdekvdeeadrmvnemrerlralqn

    Sequence, based on observed residues (ATOM records):
    >6zh3D (D:)
mdyikkaiwgpdpkeqqrrirsvlrkngrniekslreltvlqnktqqlikksakkndvrt
vrlyakelyqinkqydrmytsraqldsvrmkideairmntlsnqmadsaglmrevnslvr
lpqlrntmielekelmksgiisemvddtmesvgdvgeemdeavdeevnki