PDB entry 6zbj

View 6zbj on RCSB PDB site
Description: plasmodium falciparum merozoite surface protein 1 dimer, conformation 1
Deposited on 2020-06-08, released 2021-05-19
The last revision was dated 2021-06-23, with a file datestamp of 2021-06-18.
Experiment type: EM
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Precursor of the major merozoite surface antigens
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: gp190/ MSA1/ MSP1/ PMMSA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Merozoite surface protein-1
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: MSP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Precursor of the major merozoite surface antigens
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: gp190/ MSA1/ MSP1/ PMMSA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Merozoite surface protein-1
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: MSP1
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6zbjA (A:)
vthesyqelvkklealedavltgyslfqkekmvlneeeittkgasaqsgasaqsgasaqs
gasaqsgasaqsgasaqsgtsgpsgpsgtspssrsntlprsntssgasppadasdsdaks
yadlkhrvrnylftikelkypelfdltnhmltlcdnihgfkylidgyeeinellyklnfy
fdllraklndvcandycqipfnlkiraneldvlkklvfgyrkpldnikdnvgkmedyikk
nkttianineliegskktidqnknadneegkkklyqaqydlsiynkqleeahnlisvlek
ridtlkknenikklldkineiknpppansgntpntlldknkkieeheekikeiaktikfn
idslftdpleleyylreknkkvdvtpksqdptksvqipkvpypngivyplpltdihnsla
adndknsygdlmnphtkekinekiitdnkerkifinnikkkidleekninhtkeqnkkll
edyekskkdyeellekfyemkfnnnfdkdvvdkifsarytynvekqrynnkfsssnnsvy
nvqklkkalsyledyslrkgisekdfnhyytlktgleadikklteeikssenkileknfk
glthsangslevsdivklqvqkvllikkiedlrkielflknaqlkdsihvpniykpqnkp
epyylivlkkevdklkefipkvkdmlkkeqavlssitqplvaasettedgghsthtlsqs
getevteeteeteetvghtttvtitlpptqpsppkevkvvensieqksndnsqaltktvy
lkkldefltksyichkyilvsnssmdqkllevynltpeeenelkscdpldllfniqnnip
amyslydsmnndlqhlffelyqkemiyylhklkeenhikklleeqkqitgt

    Sequence, based on observed residues (ATOM records):
    >6zbjA (A:)
vthesyqelvkklealedavltgyslfqklkhrvrnylftikelkypelfdltnhmltlc
dnihgfkylidgyeeinellyklnfyfdllraklndvcandycqipfnlkiraneldvlk
klvfgyrkpldnikdnvgkmedyikknkttianineliegskktidqnknadneegkkkl
yqaqydlsiynkqleeahnlisvlekridtlkknenikklldkinlldknkkieeheeki
keiaktikfnidslftdpleleyylreknkkvkvpypngivyplpltdihnslaadndkn
sygdlmnphtkekinekiitdnkerkifinnikkkidleekninhtkeqnkklledyeks
kkdyeellekfyemkfnnnfdkdvvdkifsarytynvekqrynnkfsssnnsvynvqklk
kalsyledyslrkgisekdfnhyytlktgleadikklteeikssenkilekevsdivklq
vqkvllikkiedlrkielflknaqlkdsihvpniykpqnkpepyylivlkkevdklkefi
pkvkdmlkkeqavtktvylkkldefltksyichkyilvsnssmdqkllevynltpeeene
lkscdpldllfniqnnipamyslydsmnndlqhlffelyqkemiyylhklkeenhikkll
eeqkqi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6zbjB (B:)
sstsspgnttvntaqsathsnsqnqqsnasstntqngvavssgpavveeshdpltvlsis
ndlkgivsllnlgnktkvpnpltisttemekfyenilknndtyfnddikqfvksnskvit
gltetqknalndeikklkdtlqlsfdlynkyklkldrlfnkkkelgqdkmqikkltllke
qlesklnslnnphnvlqnfsvffnkkkeaeiaetentlentkillkhykglvkyyngess
plktlsevsiqtednyanlekfrvlskidgklndnlhlgkkklsflssglhhlitelkev
iknknytgnspsennkkvnealksyenflpeakvttvvtppqpdvtpsplsvrvsgssgs
tkeetqiptsgslltelqqvvqlqnydeeddslvvlpifgesedndeyldqvvtgeaisv
tmdnilsgfeneydviylkplagvyrslkkqiekniftfnlnlndilnsrlkkrkyfldv
lesdlmqfkhissneyiiedsfkllnseqkntllksykyikesvendikfaqegisyyek
vlakykddlesikkvikeekekfpssppttppspaktdeqkkeskflpfltnietlynnl
vnkiddylinlkakindcnvekdeahvkitklsdlkaiddkidlfknpydfeaikklind
dtkkdmlgkllstglvqnfpntiiskliegkfqdmlnisqhqcvkkqcpensgcfrhlde
reeckcllnykqegdkcvenpnptcnennggcdadatcteedsgssrkkitcectkpdsy
plfdgifcsssn

    Sequence, based on observed residues (ATOM records):
    >6zbjB (B:)
gvavssgpavveeshdpltvlsisndlkgivsllnlgnktkvpnpltisttemekfyeni
lknndtyfnddikqfvksnskvitgltetqknalndeikklkdtlqlsfdlynkyklkld
rlfnkkkelgqdkmqikkltllkeqlesklnslnnphnvlqnfsvffnkkkeaeiaeten
tlentkillkhykglvkyyngessplktlsevsiqtednyanlekfrvlskidgklndnl
hlgkkklsflssglhhlitelkeviknknytgnspsennkkvnealksyenflpealsgf
eneydviylkplagvyrslkkqiekniftfnlnlndilnsrlkkrkyfldvlesdlmqfk
hissneyiiedsfkllnseqkntllksykyikesvendikfaqegisyyekvlakykddl
esikkvikeekekfpeskflpfltnietlynnlvnkiddylinlkakindcnvekdeahv
kitklsdlkaiddkidlfknp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6zbjC (C:)
vthesyqelvkklealedavltgyslfqkekmvlneeeittkgasaqsgasaqsgasaqs
gasaqsgasaqsgasaqsgtsgpsgpsgtspssrsntlprsntssgasppadasdsdaks
yadlkhrvrnylftikelkypelfdltnhmltlcdnihgfkylidgyeeinellyklnfy
fdllraklndvcandycqipfnlkiraneldvlkklvfgyrkpldnikdnvgkmedyikk
nkttianineliegskktidqnknadneegkkklyqaqydlsiynkqleeahnlisvlek
ridtlkknenikklldkineiknpppansgntpntlldknkkieeheekikeiaktikfn
idslftdpleleyylreknkkvdvtpksqdptksvqipkvpypngivyplpltdihnsla
adndknsygdlmnphtkekinekiitdnkerkifinnikkkidleekninhtkeqnkkll
edyekskkdyeellekfyemkfnnnfdkdvvdkifsarytynvekqrynnkfsssnnsvy
nvqklkkalsyledyslrkgisekdfnhyytlktgleadikklteeikssenkileknfk
glthsangslevsdivklqvqkvllikkiedlrkielflknaqlkdsihvpniykpqnkp
epyylivlkkevdklkefipkvkdmlkkeqavlssitqplvaasettedgghsthtlsqs
getevteeteeteetvghtttvtitlpptqpsppkevkvvensieqksndnsqaltktvy
lkkldefltksyichkyilvsnssmdqkllevynltpeeenelkscdpldllfniqnnip
amyslydsmnndlqhlffelyqkemiyylhklkeenhikklleeqkqitgt

    Sequence, based on observed residues (ATOM records):
    >6zbjC (C:)
vthesyqelvkklealedavltgyslfqklkhrvrnylftikelkypelfdltnhmltlc
dnihgfkylidgyeeinellyklnfyfdllraklndvcandycqipfnlkiraneldvlk
klvfgyrkpldnikdnvgkmedyikknkttianineliegskktidqnknadneegkkkl
yqaqydlsiynkqleeahnlisvlekridtlkknenikklldkinlldknkkieeheeki
keiaktikfnidslftdpleleyylreknkkvkvpypngivyplpltdihnslaadndkn
sygdlmnphtkekinekiitdnkerkifinnikkkidleekninhtkeqnkklledyeks
kkdyeellekfyemkfnnnfdkdvvdkifsarytynvekqrynnkfsssnnsvynvqklk
kalsyledyslrkgisekdfnhyytlktgleadikklteeikssenkilekevsdivklq
vqkvllikkiedlrkielflknaqlkdsihvpniykpqnkpepyylivlkkevdklkefi
pkvkdmlkkeqavtktvylkkldefltksyichkyilvsnssmdqkllevynltpeeene
lkscdpldllfniqnnipamyslydsmnndlqhlffelyqkemiyylhklkeenhikkll
eeqkqi

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6zbjD (D:)
sstsspgnttvntaqsathsnsqnqqsnasstntqngvavssgpavveeshdpltvlsis
ndlkgivsllnlgnktkvpnpltisttemekfyenilknndtyfnddikqfvksnskvit
gltetqknalndeikklkdtlqlsfdlynkyklkldrlfnkkkelgqdkmqikkltllke
qlesklnslnnphnvlqnfsvffnkkkeaeiaetentlentkillkhykglvkyyngess
plktlsevsiqtednyanlekfrvlskidgklndnlhlgkkklsflssglhhlitelkev
iknknytgnspsennkkvnealksyenflpeakvttvvtppqpdvtpsplsvrvsgssgs
tkeetqiptsgslltelqqvvqlqnydeeddslvvlpifgesedndeyldqvvtgeaisv
tmdnilsgfeneydviylkplagvyrslkkqiekniftfnlnlndilnsrlkkrkyfldv
lesdlmqfkhissneyiiedsfkllnseqkntllksykyikesvendikfaqegisyyek
vlakykddlesikkvikeekekfpssppttppspaktdeqkkeskflpfltnietlynnl
vnkiddylinlkakindcnvekdeahvkitklsdlkaiddkidlfknpydfeaikklind
dtkkdmlgkllstglvqnfpntiiskliegkfqdmlnisqhqcvkkqcpensgcfrhlde
reeckcllnykqegdkcvenpnptcnennggcdadatcteedsgssrkkitcectkpdsy
plfdgifcsssn

    Sequence, based on observed residues (ATOM records):
    >6zbjD (D:)
gvavssgpavveeshdpltvlsisndlkgivsllnlgnktkvpnpltisttemekfyeni
lknndtyfnddikqfvksnskvitgltetqknalndeikklkdtlqlsfdlynkyklkld
rlfnkkkelgqdkmqikkltllkeqlesklnslnnphnvlqnfsvffnkkkeaeiaeten
tlentkillkhykglvkyyngessplktlsevsiqtednyanlekfrvlskidgklndnl
hlgkkklsflssglhhlitelkeviknknytgnspsennkkvnealksyenflpealsgf
eneydviylkplagvyrslkkqiekniftfnlnlndilnsrlkkrkyfldvlesdlmqfk
hissneyiiedsfkllnseqkntllksykyikesvendikfaqegisyyekvlakykddl
esikkvikeekekfpeskflpfltnietlynnlvnkiddylinlkakindcnvekdeahv
kitklsdlkaiddkidlfknp