PDB entry 6zbg

View 6zbg on RCSB PDB site
Description: merozoite surface protein 1 (msp-1) from plasmodium falciparum, alternative conformation 4
Deposited on 2020-06-08, released 2021-05-19
The last revision was dated 2021-06-23, with a file datestamp of 2021-06-18.
Experiment type: EM
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Merozoite surface antigens
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: gp190/ MSA1/ MSP1/ PMMSA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Merozoite surface antigens
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: MSP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Merozoite surface protein-1
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: MSP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Merozoite surface protein 1
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: MSP1
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6zbgA (A:)
    vthesyqelvkklealedavltgyslfqkekmvlneeeittkgasaqsgasaqsgasaqs
    gasaqsgasaqsgasaqsgtsgpsgpsgtspssrsntlprsntssgasppadasdsdaks
    yadlkhrvrnylftikelkypelfdltnhmltlcdnihgfkylidgyeeinellyklnfy
    fdllraklndvcandycqipfnlkiraneldvlkklvfgyrkpldnikdnvgkmedyikk
    nkttianineliegskktidqnknadneegkkklyqaqydlsiynkqleeahnlisvlek
    ridtlkknenikklldkineiknpppansgntpntlldknkkieeheekikeiaktikfn
    idslftdpleleyylreknkkvdvtpksqdptksvqipkvpypngivyplpltdihnsla
    adndknsygdlmnphtkekinekiitdnkerkifinnikkkidleekninhtkeqnkkll
    edyekskkdyeellekfyemkfnnnfdkdvvdkifsarytynvekqrynnkfsssnnsvy
    nvqklkkalsyledyslrkgisekdfnhyytlktgleadikklteeikssenkileknfk
    glthsangslevsdivklqvqkvllikkiedlrkielflknaqlkdsihvpniykpqnkp
    epyylivlkkevdklkefipkvkdmlkkeqavlssitqplvaasettedgghsthtl
    

    Sequence, based on observed residues (ATOM records):
    >6zbgA (A:)
    vthesyqelvkklealedavltgyslfqkekmvlyadlkhrvrnylftikelkypelfdl
    tnhmltlcdnihgfkylidgyeeinellyklnfyfdllraklndvcandycqipfnlkir
    aneldvlkklvfgyrkpldnikdnvgkmedyikknkttianineliegskktidqnknad
    neegkkklyqaqydlsiynkqleeahnlisvlekridtlkknenikklldkinlldknkk
    ieeheekikeiaktikfnidslftdpleleyylreknkkvkvpypngivyplpltdihns
    laadndknsygdlmnphtkekinekiitdnkerkifinnikkkidleekninhtkeqnkk
    lledyekskkdyeellekfyemkfnnnfdkdvvdkifsarytynvekqrynnkfsssnns
    vynvqklkkalsyledyslrkgisekdfnhyytlktgleadikklteeikssenkileke
    vsdivklqvqkvllikkiedlrkielflknaqlkdsihvpniykpqnkpepyylivlkke
    vdklkefipkvkdmlkkeqavl
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6zbgB (B:)
    sqsgetevteeteeteetvghtttvtitlpptqpsppkevkvvensieqksndnsqaltk
    tvylkkldefltksyichkyilvsnssmdqkllevynltpeeenelkscdpldllfniqn
    nipamyslydsmnndlqhlffelyqkemiyylhklkeenhikklleeqkqitgt
    

    Sequence, based on observed residues (ATOM records):
    >6zbgB (B:)
    ltktvylkkldefltksyichkyilvsnssmdqkllevynltpeeenelkscdpldllfn
    iqnnipamyslydsmnndlqhlffelyqkemiyylhklkeenhikklleeqk
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6zbgC (C:)
    sstsspgnttvntaqsathsnsqnqqsnasstntqngvavssgpavveeshdpltvlsis
    ndlkgivsllnlgnktkvpnpltisttemekfyenilknndtyfnddikqfvksnskvit
    gltetqknalndeikklkdtlqlsfdlynkyklkldrlfnkkkelgqdkmqikkltllke
    qlesklnslnnphnvlqnfsvffnkkkeaeiaetentlentkillkhykglvkyyngess
    plktlsevsiqtednyanlekfrvlskidgklndnlhlgkkklsflssglhhlitelkev
    iknknytgnspsennkkvnealksyenflpeakvttvvtppqpdvtpsplsvrvsgssgs
    tkeetqiptsgslltelqqvvqlqnydeeddslvvlpifgesedndeyldqvvtge
    

    Sequence, based on observed residues (ATOM records):
    >6zbgC (C:)
    vavsspltvlsisndlkgivsllnlgnktkvpnpltisttemekfyenilknndtyfndd
    ikqfvksnskvitgltetqknalndeikklkdtlqlsfdlynkyklkldrlfnkkkelgq
    dkmqikkltllkeqlesklnslnnphnvlqnfsvffnkkkeaeiaetentlentkillkh
    ykglvkyyngessplktlsevsiqtednyanlekfrvlskidgklndnlhlgkkklsfls
    sglhhlitelkeviknknytgnspsennkkvnealksyenflpea
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6zbgD (D:)
    aisvtmdnilsgfeneydviylkplagvyrslkkqiekniftfnlnlndilnsrlkkrky
    fldvlesdlmqfkhissneyiiedsfkllnseqkntllksykyikesvendikfaqegis
    yyekvlakykddlesikkvikeekekfpssppttppspaktdeqkkeskflpfltnietl
    ynnlvnkiddylinlkakindcnvekdeahvkitklsdlkaiddkidlfknpydfeaikk
    linddtkkdmlgkllstglvqnfpntiiskliegkfqdmlnisqhqcvkkqcpensgcfr
    hldereeckcllnykqegdkcvenpnptcnennggcdadatcteedsgssrkkitcectk
    pdsyplfdgifcsssn
    

    Sequence, based on observed residues (ATOM records):
    >6zbgD (D:)
    lsgfeneydviylkplagvyrslkkqiekniftfnlnlndilnsrlkkrkyfldvlesdl
    mqfkhissneyiiedsfkllnseqkntllksykyikesvendikfaqegisyyekvlaky
    kddlesikkvikeekekfeskflpfltnietlynnlvnkiddylinlkakindcnvekde
    ahvkitklsdlkaiddkidlf