PDB entry 6zbc

View 6zbc on RCSB PDB site
Description: merozoite surface protein 1 (msp-1) from plasmodium falciparum, main conformation
Deposited on 2020-06-08, released 2021-05-19
The last revision was dated 2021-06-23, with a file datestamp of 2021-06-18.
Experiment type: EM
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Merozoite surface antigens
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: gp190/ MSA1/ MSP1/ PMMSA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Merozoite surface antigens
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: MSP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Merozoite surface protein-1
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: MSP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Merozoite surface protein 1
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: MSP1
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6zbcA (A:)
vthesyqelvkklealedavltgyslfqkekmvlneeeittkgasaqsgasaqsgasaqs
gasaqsgasaqsgasaqsgtsgpsgpsgtspssrsntlprsntssgasppadasdsdaks
yadlkhrvrnylftikelkypelfdltnhmltlcdnihgfkylidgyeeinellyklnfy
fdllraklndvcandycqipfnlkiraneldvlkklvfgyrkpldnikdnvgkmedyikk
nkttianineliegskktidqnknadneegkkklyqaqydlsiynkqleeahnlisvlek
ridtlkknenikklldkineiknpppansgntpntlldknkkieeheekikeiaktikfn
idslftdpleleyylreknkkvdvtpksqdptksvqipkvpypngivyplpltdihnsla
adndknsygdlmnphtkekinekiitdnkerkifinnikkkidleekninhtkeqnkkll
edyekskkdyeellekfyemkfnnnfdkdvvdkifsarytynvekqrynnkfsssnnsvy
nvqklkkalsyledyslrkgisekdfnhyytlktgleadikklteeikssenkileknfk
glthsangslevsdivklqvqkvllikkiedlrkielflknaqlkdsihvpniykpqnkp
epyylivlkkevdklkefipkvkdmlkkeqavlssitqplvaasettedgghsthtl

    Sequence, based on observed residues (ATOM records):
    >6zbcA (A:)
vthesyqelvkklealedavltgyslfqkekmvlyadlkhrvrnylftikelkypelfdl
tnhmltlcdnihgfkylidgyeeinellyklnfyfdllraklndvcandycqipfnlkir
aneldvlkklvfgyrkpldnikdnvgkmedyikknkttianineliegskktidqnknad
neegkkklyqaqydlsiynkqleeahnlisvlekridtlkknenikklldkinlldknkk
ieeheekikeiaktikfnidslftdpleleyylreknkkvkvpypngivyplpltdihns
laadndknsygdlmnphtkekinekiitdnkerkifinnikkkidleekninhtkeqnkk
lledyekskkdyeellekfyemkfnnnfdkdvvdkifsarytynvekqrynnkfsssnns
vynvqklkkalsyledyslrkgisekdfnhyytlktgleadikklteeikssenkileke
vsdivklqvqkvllikkiedlrkielflknaqlkdsihvpniykpqnkpepyylivlkke
vdklkefipkvkdmlkkeqavl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6zbcB (B:)
sqsgetevteeteeteetvghtttvtitlpptqpsppkevkvvensieqksndnsqaltk
tvylkkldefltksyichkyilvsnssmdqkllevynltpeeenelkscdpldllfniqn
nipamyslydsmnndlqhlffelyqkemiyylhklkeenhikklleeqkqitgt

    Sequence, based on observed residues (ATOM records):
    >6zbcB (B:)
ltktvylkkldefltksyichkyilvsnssmdqkllevynltpeeenelkscdpldllfn
iqnnipamyslydsmnndlqhlffelyqkemiyylhklkeenhikklleeqk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6zbcC (C:)
sstsspgnttvntaqsathsnsqnqqsnasstntqngvavssgpavveeshdpltvlsis
ndlkgivsllnlgnktkvpnpltisttemekfyenilknndtyfnddikqfvksnskvit
gltetqknalndeikklkdtlqlsfdlynkyklkldrlfnkkkelgqdkmqikkltllke
qlesklnslnnphnvlqnfsvffnkkkeaeiaetentlentkillkhykglvkyyngess
plktlsevsiqtednyanlekfrvlskidgklndnlhlgkkklsflssglhhlitelkev
iknknytgnspsennkkvnealksyenflpeakvttvvtppqpdvtpsplsvrvsgssgs
tkeetqiptsgslltelqqvvqlqnydeeddslvvlpifgesedndeyldqvvtge

    Sequence, based on observed residues (ATOM records):
    >6zbcC (C:)
vavsspltvlsisndlkgivsllnlgnktkvpnpltisttemekfyenilknndtyfndd
ikqfvksnskvitgltetqknalndeikklkdtlqlsfdlynkyklkldrlfnkkkelgq
dkmqikkltllkeqlesklnslnnphnvlqnfsvffnkkkeaeiaetentlentkillkh
ykglvkyyngessplktlsevsiqtednyanlekfrvlskidgklndnlhlgkkklsfls
sglhhlitelkeviknknytgnspsennkkvnealksyenflpea

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6zbcD (D:)
aisvtmdnilsgfeneydviylkplagvyrslkkqiekniftfnlnlndilnsrlkkrky
fldvlesdlmqfkhissneyiiedsfkllnseqkntllksykyikesvendikfaqegis
yyekvlakykddlesikkvikeekekfpssppttppspaktdeqkkeskflpfltnietl
ynnlvnkiddylinlkakindcnvekdeahvkitklsdlkaiddkidlfknpydfeaikk
linddtkkdmlgkllstglvqnfpntiiskliegkfqdmlnisqhqcvkkqcpensgcfr
hldereeckcllnykqegdkcvenpnptcnennggcdadatcteedsgssrkkitcectk
pdsyplfdgifcsssn

    Sequence, based on observed residues (ATOM records):
    >6zbcD (D:)
lsgfeneydviylkplagvyrslkkqiekniftfnlnlndilnsrlkkrkyfldvlesdl
mqfkhissneyiiedsfkllnseqkntllksykyikesvendikfaqegisyyekvlaky
kddlesikkvikeekekfeskflpfltnietlynnlvnkiddylinlkakindcnvekde
ahvkitklsdlkaiddkidlf