PDB entry 6zab

View 6zab on RCSB PDB site
Description: structure of the transcriptional repressor atu1419 (vanr) from agrobacterium fabrum in complex a palindromic dna (p6422 space group)
Deposited on 2020-06-05, released 2020-12-02
The last revision was dated 2021-01-20, with a file datestamp of 2021-01-15.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transcriptional regulator, GntR family
    Species: Agrobacterium fabrum (strain C58 / ATCC 33970) [TaxId:176299]
    Gene: Atu1419
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (5'-d(*ap*tp*gp*tp*ap*tp*ap*cp*ap*t)-3')
    Species: Agrobacterium fabrum str. C58 [TaxId:176299]
  • Heterogens: ZN, CIT, PEG, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6zabA (A:)
mrqvdaathggravielrekilsgelpggmrlfevstaelldisrtpvrealsrlteegl
lnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlc
fgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkaniga
frrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpgla
lisdhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6zabA (A:)
aathggravielrekilsgelpggmrlfevstaelldisrtpvrealsrlteegllnrlp
gggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrv
ddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrsl
rgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd

  • Chain 'B':
    No sequence available.