PDB entry 6z8g

View 6z8g on RCSB PDB site
Description: crystal structure of vsg13 soaked in 0.5 m used to phase vsg13 to solve the structure.
Deposited on 2020-06-02, released 2021-03-17
The last revision was dated 2021-03-17, with a file datestamp of 2021-03-12.
Experiment type: XRAY
Resolution: 1.56 Å
R-factor: N/A
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Variant surface glycoprotein MITat 1.13
    Species: Trypanosoma brucei [TaxId:5691]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Variant surface glycoprotein MITat 1.13
    Species: Trypanosoma brucei [TaxId:5691]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: BR, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6z8gA (A:)
mqrlgtavffllafrysteqavglkepnapcttacgcksrllkrldlytskyadginner
enseaysklvtaalaavptmqrkilpllgaaadildicrrelatarplvqaaiskieeaa
gvyntlhklerglgeakiefggtdlrltktkfratslgtihtadcpnadpgetnvkigle
heenepepaklithghldatcasgvgqssschttaveanthltlgltfsgsskdesatwn
aatnnkraihsndadflgsnatvahealkairsagastpcsslitdfnavranpkfklmv
ikallnkptaekesdapadevnnainsaygregseyntktwkdigstripkadppgektd
tidklsslpqwgdaiarlllqeitkqeeqsiktssdeatnkecdkhtaktegectklgcd
ydaenkkckpksekettaagkkdraagetgcakhgtdkdkcendksckwennackdssil
atkkfalsmvsaafvtllf

    Sequence, based on observed residues (ATOM records):
    >6z8gA (A:)
napcttacgcksrllkrldlytskyadginnerenseaysklvtaalaavptmqrkilpl
lgaaadildicrrelatarplvqaaiskieeaagvyntlhklerglgeakiefggtdlrl
tktkfratslgtihtadcpnadekigleheenepepaklithghldatcasgssctavea
nthltlgltfsgsskdesatwnaatnnkraihsndadflgsnatvahealkairsagast
pcsslitdfnavranpkfklmvikallnkptaekesdapadevnnainsaygregseynt
ktwkdigstripkadppgektdtidklsslpqwgdaiarlllqeit

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6z8gB (B:)
mqrlgtavffllafrysteqavglkepnapcttacgcksrllkrldlytskyadginner
enseaysklvtaalaavptmqrkilpllgaaadildicrrelatarplvqaaiskieeaa
gvyntlhklerglgeakiefggtdlrltktkfratslgtihtadcpnadpgetnvkigle
heenepepaklithghldatcasgvgqssschttaveanthltlgltfsgsskdesatwn
aatnnkraihsndadflgsnatvahealkairsagastpcsslitdfnavranpkfklmv
ikallnkptaekesdapadevnnainsaygregseyntktwkdigstripkadppgektd
tidklsslpqwgdaiarlllqeitkqeeqsiktssdeatnkecdkhtaktegectklgcd
ydaenkkckpksekettaagkkdraagetgcakhgtdkdkcendksckwennackdssil
atkkfalsmvsaafvtllf

    Sequence, based on observed residues (ATOM records):
    >6z8gB (B:)
napcttacgcksrllkrldlytskyadginnerenseaysklvtaalaavptmqrkilpl
lgaaadildicrrelatarplvqaaiskieeaagvyntlhklerglgeakieftdlrltk
tkfratslgtihtadcpnevkigleheenepepaklithghldatcasgvgqssschtta
veanthltlgltfsgsskdesatwnaatnnkraihsndadflgsnatvahealkairsag
astpcsslitdfnavranpkfklmvikallnkptaekesdapadevnnainsaygregse
yntktwkdigstripkadppgektdtidklsslpqwgdaiarlllqeit