PDB entry 6z3p

View 6z3p on RCSB PDB site
Description: Structure of EV71 in complex with a protective antibody 38-3-11A Fab
Class: virus
Keywords: EV71, antibody 38-3-11A, antibody 38-1-10A, EV71-Fab complex, VIRUS
Deposited on 2020-05-21, released 2020-09-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-10-28, with a file datestamp of 2020-10-23.
Experiment type: EM
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: vp1
    Species: ENTEROVIRUS A71 [TaxId:39054]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6z3pa_
  • Chain 'B':
    Compound: vp2
    Species: ENTEROVIRUS A71 [TaxId:39054]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6z3pb_
  • Chain 'C':
    Compound: vp3
    Species: ENTEROVIRUS A71 [TaxId:39054]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6z3pc_
  • Chain 'D':
    Compound: vp4
    Species: ENTEROVIRUS A71 [TaxId:39054]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Z3P
    Domains in SCOPe 2.08: d6z3ph_
  • Chain 'L':
    Compound: light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Z3P
    Domains in SCOPe 2.08: d6z3pl_
  • Heterogens: SPH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6z3pA (A:)
gdrvadmiessignsvsraltqalpaptgqntqvsshrldtgevpalqaaeigassntsd
esmietrcvlnshstaettldsffsraglvgeidlplegttnpngyanwdiditgyaqmr
rkvelftymrfdaeftfvactptgqvvpqllqymfvppgapkpesreslawqtatnpsvf
vkltdppaqvsvpfmspasayqwfydgyptfgehkqekdleygacpnnmmgtfsvrtvgs
skskyalvvriymrmkhvrawiprpmrnqnylfkanpnyagdsikptgtsrnaittl

    Sequence, based on observed residues (ATOM records): (download) 
    >6z3pA (A:)
drvadmiessignsvsraltqalpaptgqntqvsshrldtgevpalqaaeigassntsde
smietrcvlnshstaettldsffsraglvgeidlplegttnpngyanwdiditgyaqmrr
kvelftymrfdaeftfvactptgqvvpqllqymfvppgapkpesreslawqtatnpsvfv
kltdppaqvsvpfmspasayqwfydgyptfgehkqekdleygacpnnmmgtfsvrtvgss
kskyalvvriymrmkhvrawiprpmrnqnylfkanpnyagdsikptgtsrnaittl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6z3pB (B:)
spsaeacgysdrvaqltignstittqeaaniivgygewpsycsdddatavdkptrpdvsv
nrfytldtklweksskgwywkfpdvltetgvfgqnaqfhylyrsgfcihvqcnaskfhqg
allvailpeyvigtvaggtgtedshppyiqtqpgadgfelqhpyvldagipisqltvcph
qwinlrtnncatiivpymntlpfdsalnhcnfgllvvpispldfdqgatpvipititlap
mcsefaglrqavtq

    Sequence, based on observed residues (ATOM records): (download) 
    >6z3pB (B:)
sdrvaqltignstittqeaaniivgygewpsycsdddatavdkptrpdvsvnrfytldtk
lweksskgwywkfpdvltetgvfgqnaqfhylyrsgfcihvqcnaskfhqgallvailpe
yvigtvaggtgtedshppyiqtqpgadgfelqhpyvldagipisqltvcphqwinlrtnn
catiivpymntlpfdsalnhcnfgllvvpispldfdqgatpvipititlapmcsefaglr
qavtq

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6z3pC (C:)
gfptelkpgtnqflttddgvsapilpnfhptpcihipgevrnllelcqvetilevnnvpt
natslmerlrfpvsaqagkgelcavfradpgrdgpwqstmlgqlcgyytqwsgslevtfm
ftgsfmatgkmliaytppggplpkdratamlgthviwdfglqssvtlvipwisnthyrah
ardgvfdyyttglvsiwyqtnyvvpigapntayiialaaaqknftmklckdtshilqtas
iq

  • Chain 'D':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6z3pH (H:)
mgwsciilflvatatgvhsevqlvqsgaevkkpgeslkisckgsgysftsywigwvrqmp
gkglewmgiiypgdsdtryspsfqgqvtisadksistaylqwsslkasdtamyycarlhs
sswfygmdvwgqgttvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvs
wnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep
kscdk

    Sequence, based on observed residues (ATOM records): (download) 
    >6z3pH (H:)
evqlvqsgaevkkpgeslkisckgsgysftsywigwvrqmpgkglewmgiiypgdsdtry
spsfqgqvtisadksistaylqwsslkasdtamyycarlhssswfygmdvwgqgttvtvs
s

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6z3pL (L:)
mgwsciilflvatatgvhsdiqmtqspsslsasvgdrvtitcrasqsissylnwyqqkpg
kapklliyaasslqsgvpsrfsgsgsgtdftltisslqpedfatyycqqsystprtfgpg
tkvdikrtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqe
svteqdskdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6z3pL (L:)
diqmtqspsslsasvgdrvtitcrasqsissylnwyqqkpgkapklliyaasslqsgvps
rfsgsgsgtdftltisslqpedfatyycqqsystprtfgpgtkvdikr