PDB entry 6z1m

View 6z1m on RCSB PDB site
Description: structure of an ancestral glycosidase (family 1) bound to heme
Deposited on 2020-05-14, released 2020-07-22
The last revision was dated 2021-01-27, with a file datestamp of 2021-01-22.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ancestral reconstructed glycosidase
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Z1M
  • Chain 'B':
    Compound: ancestral reconstructed glycosidase
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Z1M
  • Chain 'C':
    Compound: ancestral reconstructed glycosidase
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Z1M
  • Heterogens: HEM, GOL, EDO, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6z1mA (A:)
mtqtaakslkfpkdflwgaataayqiegaanedgrgpsiwdtfshtpgkvhngdngdvac
dhyhrykedvelmkelglnayrfsiswprilpegegkvnqkgldfynnlidellengiep
fvtlyhwdlpqalqdkggwenretvdafaeyarvcferfgdrvkywitfnepnvfavlgy
lsgvhppgmkdlkkafraahnlllaharavkayreisqngqigitlnlspvypasdneee
dkaaaeradqfnnwfldpifkgkyehmlerlgeqiaanggelpeitdemeilsasldfig
lnyytsnlvranpnsgsssvkppdlprtdmgweiypeglydllkrihekynlpiyiteng
mavddevedgavhdtnridylkehleavhkaieegvnvrgyfvwslmdnfewangyskrf
gliyvdyktqkrtpkksaywyreviksnglelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6z1mA (A:)
lkfpkdflwgaataayqiegaanedgrgpsiwdtfshtpgkvhngdngdvacdhyhryke
dvelmkelglnayrfsiswprilpegegkvnqkgldfynnlidellengiepfvtlyhwd
lpqalqdkggwenretvdafaeyarvcferfgdrvkywitfnepnvfavlgylsgvhppg
mkdlkkafraahnlllaharavkayreisqngqigitlnlspvypasdneeedkaaaera
dqfnnwfldpifkgkyehmlerlgeqiaanggelpeitdemeilsasldfiglnyytsnl
tdmgweiypeglydllkrihekynlpiyitengmavddevedgavhdtnridylkehlea
vhkaieegvnvrgyfvwslmdnfewangyskrfgliyvdyktqkrtpkksaywyreviks
ngl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6z1mB (B:)
mtqtaakslkfpkdflwgaataayqiegaanedgrgpsiwdtfshtpgkvhngdngdvac
dhyhrykedvelmkelglnayrfsiswprilpegegkvnqkgldfynnlidellengiep
fvtlyhwdlpqalqdkggwenretvdafaeyarvcferfgdrvkywitfnepnvfavlgy
lsgvhppgmkdlkkafraahnlllaharavkayreisqngqigitlnlspvypasdneee
dkaaaeradqfnnwfldpifkgkyehmlerlgeqiaanggelpeitdemeilsasldfig
lnyytsnlvranpnsgsssvkppdlprtdmgweiypeglydllkrihekynlpiyiteng
mavddevedgavhdtnridylkehleavhkaieegvnvrgyfvwslmdnfewangyskrf
gliyvdyktqkrtpkksaywyreviksnglelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6z1mB (B:)
slkfpkdflwgaataayqiegaanedgrgpsiwdtfshtpgkvhngdngdvacdhyhryk
edvelmkelglnayrfsiswprilpegegkvnqkgldfynnlidellengiepfvtlyhw
dlpqalqdkggwenretvdafaeyarvcferfgdrvkywitfnepnvfavlgylsgvhpp
gmkdlkkafraahnlllaharavkayreisqngqigitlnlspvyneeedkaaaeradqf
nnwfldpifkgkyehmlerlgeqiaanggelpeitdemeilsasldfiglnyytsnlvrt
dmgweiypeglydllkrihekynlpiyitengmavddevedgavhdtnridylkehleav
hkaieegvnvrgyfvwslmdnfewangyskrfgliyvdyktqkrtpkksaywyreviksn
gl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6z1mC (C:)
mtqtaakslkfpkdflwgaataayqiegaanedgrgpsiwdtfshtpgkvhngdngdvac
dhyhrykedvelmkelglnayrfsiswprilpegegkvnqkgldfynnlidellengiep
fvtlyhwdlpqalqdkggwenretvdafaeyarvcferfgdrvkywitfnepnvfavlgy
lsgvhppgmkdlkkafraahnlllaharavkayreisqngqigitlnlspvypasdneee
dkaaaeradqfnnwfldpifkgkyehmlerlgeqiaanggelpeitdemeilsasldfig
lnyytsnlvranpnsgsssvkppdlprtdmgweiypeglydllkrihekynlpiyiteng
mavddevedgavhdtnridylkehleavhkaieegvnvrgyfvwslmdnfewangyskrf
gliyvdyktqkrtpkksaywyreviksnglelehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6z1mC (C:)
kslkfpkdflwgaataayqiegaanedgrgpsiwdtfshtpgkvhngdngdvacdhyhry
kedvelmkelglnayrfsiswprilpegegkvnqkgldfynnlidellengiepfvtlyh
wdlpqalqdkggwenretvdafaeyarvcferfgdrvkywitfnepnvfavlgylsgvhp
pgmkdlkkafraahnlllaharavkayreisqngqigitlnlspvypasdneeedkaaae
radqfnnwfldpifkgkyehmlerlgeqiaapeitdemeilsasldfiglnyytsneiyp
eglydllkrihekynlpiyitengmavddevedgavhdtnridylkehleavhkaieegv
nvrgyfvwslmdnfewangyskrfgliyvdyktqkrtpkksaywyreviksngl