PDB entry 6z16

View 6z16 on RCSB PDB site
Description: structure of the mrp antiporter complex
Deposited on 2020-05-12, released 2020-08-12
The last revision was dated 2020-08-12, with a file datestamp of 2020-08-07.
Experiment type: EM
Resolution: 2.98 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Multisubunit Na+/H+ antiporter, A subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpA, Aflv_1952
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Multisubunit Na+/H+ antiporter, B subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpB, Aflv_1951
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Multisubunit Na+/H+ antiporter, C subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpC, Aflv_1950
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Multisubunit Na+/H+ antiporter, D subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpD, Aflv_1949
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Multisubunit Na+/H+ antiporter, E subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpE, Aflv_1948
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Multisubunit Na+/H+ antiporter, F subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpF, Aflv_1947
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Multisubunit Na+/H+ antiporter, G subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpG, Aflv_1946
    Database cross-references and differences (RAF-indexed):
  • Chain 'a':
    Compound: Multisubunit Na+/H+ antiporter, A subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpA, Aflv_1952
    Database cross-references and differences (RAF-indexed):
  • Chain 'b':
    Compound: Multisubunit Na+/H+ antiporter, B subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpB, Aflv_1951
    Database cross-references and differences (RAF-indexed):
  • Chain 'c':
    Compound: Multisubunit Na+/H+ antiporter, C subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpC, Aflv_1950
    Database cross-references and differences (RAF-indexed):
  • Chain 'd':
    Compound: Multisubunit Na+/H+ antiporter, D subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpD, Aflv_1949
    Database cross-references and differences (RAF-indexed):
  • Chain 'e':
    Compound: Multisubunit Na+/H+ antiporter, E subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpE, Aflv_1948
    Database cross-references and differences (RAF-indexed):
  • Chain 'f':
    Compound: Multisubunit Na+/H+ antiporter, F subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpF, Aflv_1947
    Database cross-references and differences (RAF-indexed):
  • Chain 'g':
    Compound: Multisubunit Na+/H+ antiporter, G subunit
    Species: Anoxybacillus flavithermus (strain DSM 21510 / WK1) [TaxId:491915]
    Gene: mrpG, Aflv_1946
    Database cross-references and differences (RAF-indexed):
  • Heterogens: PTY, K

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6z16A (A:)
mlkknetfytycsykkedgyvrrglivlptlhiamfapfllallvpffykcirslhvgwf
vfplpialfvyflsyiddvrndeviratmpwipslrisfdayvdglsllfallitgigsl
vvlysiyylqkgkeplgnfyvylllfmgamlgvvlsdhlialymfweltsissflliayw
fkrdrsrygaqksmlitmfggllmlggfvalaiaggtynirelvhtpltehplfipalvl
ilfgaftksaqfpfyiwlpdameaptpvsaylhsatmvkagiyviarltpifavssvwvw
tvalvglvtlcwasflaskqtdlkailaystvsqlglitsllgigglsfhydgmgenvfm
vavlaaifhlfnhatfkgslfmvvgivdhetgtrdirrlgglmtimpitftialigslsm
aglppfngflskemfftamlrakdvagwavilpvvawvasiftflysallvsrtffgtyk
phvlkkeaheapfgmliapivlaslvvfigfvpnvlsdsvlapavyavlyglfapneald
vhishwhgftpelfmtigvllfglvlyrtfpkwkkiyyrlsermslnffydqsfvwmerg
arsfisrvmngsmrtylmyiftslvalllftigwheqwhidlsrlahvrvyevvlaigil
aatvttviaksrltaivslgavgyavalffvlfrapdlaltqlvietisvalfllcfyhl
pkftqkqesvrfhlgnalvslavgmtmsiiaflayagkhfdsisqyyvdntyekaagknm
vnvilvdfrgfdtlfeicvlaiaalgiyamvklrlakeeer

    Sequence, based on observed residues (ATOM records):
    >6z16A (A:)
ptlhiamfapfllallvpffykcirslhvgwfvfplpialfvyflsyiddvrndevirat
mpwipslrisfdayvdglsllfallitgigslvvlysiyylqkgkeplgnfyvylllfmg
amlgvvlsdhlialymfweltsissflliaywfkrdrsrygaqksmlitmfggllmlggf
valaiaggtynirelvhtpltehplfipalvlilfgaftksaqfpfyiwlpdameaptpv
saylhsatmvkagiyviarltpifavssvwvwtvalvglvtlcwasflaskqtdlkaila
ystvsqlglitsllgigglsfhydgmgenvfmvavlaaifhlfnhatfkgslfmvvgivd
hetgtrdirrlgglmtimpitftialigslsmaglppfngflskemfftamlrakdvagw
avilpvvawvasiftflysallvsrtffgtykphvlkkeaheapfgmliapivlaslvvf
igfvpnvlsdsvlapavyavlyglfapnealdvhishwhgftpelfmtigvllfglvlyr
tfpkwkkiyyrlsermslnffydqsfvwmergarsfisrvmngsmrtylmyiftslvall
lftigwheqwhidlsrlahvrvyevvlaigilaatvttviaksrltaivslgavgyaval
ffvlfrapdlaltqlvietisvalfllcfyhlpkftqkqesvrfhlgnalvslavgmtms
iiaflayagkhfdsisqyyvdntyekaagknmvnvilvdfrgfdtlfeicvlaiaalgiy
amvklrla

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6z16B (B:)
mkrndvilrtttavvtpiivlfsvqlffaghyypgggfigglmtagaivllllafdietv
rkmvpinykwlvaigllfavgtgmssmfldrpflthaykyvhlplldhtslhtavlfdlg
vyfvvvgvtmiiietigesd

    Sequence, based on observed residues (ATOM records):
    >6z16B (B:)
rndvilrtttavvtpiivlfsvqlffaghyypgggfigglmtagaivllllafdietvrk
mvpinykwlvaigllfavgtgmssmfldrpflthaykyvhlplldhtslhtavlfdlgvy
fvvvgvtmiiietigesd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6z16C (C:)
mellmivvigclfaaatylllsksllriiigtgllshgahlllltmgglkagappllgek
asryvdplpqaliltaivisfgvtafflvlayrsyqeigtdhmegmkgd

    Sequence, based on observed residues (ATOM records):
    >6z16C (C:)
mellmivvigclfaaatylllsksllriiigtgllshgahlllltmgglkagappllgek
asryvdplpqaliltaivisfgvtafflvlayrsyqeigtdhmegmk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6z16D (D:)
msnllllpiviplvtaivliffpkhvfwqrvvslaatvglvvasgallhrvhtdgiqtln
vgnwpapfgitlvsdslsallvlttsiialaclvysfyaighkretfyyysffqflivgv
ngafttgdlfnlfvffevmlmssyvllvlggtkiqlretikytlvnvissalfvvavayl
yavtgtlnmahladrinalgsspiltviavlfiivfglkgaifplyfwlpgayyapptpv
lalfgglltkvgvysilrtftllfthdaaythtllawlalgtiiigvigavayndmryiv
iyniiaavgvmifgisimtpesvegtifyllqdmvmkamlflfvgiifsitrsndirsfs
glitsypllgwaffiaalslagipplsgfigkllivkasfdaqlifeaivillssllvly
svmkifmngfwgekkgfeqkqvdgrlfpvlfllvlsvaygigiefvrpfvldavnvlvdp
smyieavlke

    Sequence, based on observed residues (ATOM records):
    >6z16D (D:)
msnllllpiviplvtaivliffpkhvfwqrvvslaatvglvvasgallhrvhtdgiqtln
vgnwpapfgitlvsdslsallvlttsiialaclvysfyaighkretfyyysffqflivgv
ngafttgdlfnlfvffevmlmssyvllvlggtkiqlretikytlvnvissalfvvavayl
yavtgtlnmahladrinalgsspiltviavlfiivfglkgaifplyfwlpgayyapptpv
lalfgglltkvgvysilrtftllfthdaaythtllawlalgtiiigvigavayndmryiv
iyniiaavgvmifgisimtpesvegtifyllqdmvmkamlflfvgiifsitrsndirsfs
glitsypllgwaffiaalslagipplsgfigkllivkasfdaqlifeaivillssllvly
svmkifmngfwgekkgfeqkqvdgrlfpvlfllvlsvaygigiefvrpfvldavnvlvdp
smyieavlk

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6z16E (E:)
mafqillnvilafvwmfltvsfdgasflvgymiglfilfilrrffhsrfylvpvfviikl
lfiffkelilsniavakvvmqrsltiqpaifalptelkkeweitvlamlitltpgtlvld
vsddgstlyihalnspdvheaiesikqsfektimevsk

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6z16F (F:)
mmlnialvilslamvgflyrvvkgpstadriialdamgitlagivaivsmllntsafldv
illigilafvgtvafakflekgvviergndr

    Sequence, based on observed residues (ATOM records):
    >6z16F (F:)
mlnialvilslamvgflyrvvkgpstadriialdamgitlagivaivsmllntsafldvi
lligilafvgtvafakflekgvviergn

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6z16G (G:)
mssnvgtianalvvvlillgavltllsavgairlpdvytrshaisksttlgimcillgaf
lhffiennhfnsrlllgivfifmtspvaahlisraayyanverwegtvrddlkqkaggk

    Sequence, based on observed residues (ATOM records):
    >6z16G (G:)
ianalvvvlillgavltllsavgairlpdvytrshaisksttlgimcillgaflhffien
nhfnsrlllgivfifmtspvaahlisraayyanverwegtvrdd

  • Chain 'a':
    Sequence, based on SEQRES records:
    >6z16a (a:)
mlkknetfytycsykkedgyvrrglivlptlhiamfapfllallvpffykcirslhvgwf
vfplpialfvyflsyiddvrndeviratmpwipslrisfdayvdglsllfallitgigsl
vvlysiyylqkgkeplgnfyvylllfmgamlgvvlsdhlialymfweltsissflliayw
fkrdrsrygaqksmlitmfggllmlggfvalaiaggtynirelvhtpltehplfipalvl
ilfgaftksaqfpfyiwlpdameaptpvsaylhsatmvkagiyviarltpifavssvwvw
tvalvglvtlcwasflaskqtdlkailaystvsqlglitsllgigglsfhydgmgenvfm
vavlaaifhlfnhatfkgslfmvvgivdhetgtrdirrlgglmtimpitftialigslsm
aglppfngflskemfftamlrakdvagwavilpvvawvasiftflysallvsrtffgtyk
phvlkkeaheapfgmliapivlaslvvfigfvpnvlsdsvlapavyavlyglfapneald
vhishwhgftpelfmtigvllfglvlyrtfpkwkkiyyrlsermslnffydqsfvwmerg
arsfisrvmngsmrtylmyiftslvalllftigwheqwhidlsrlahvrvyevvlaigil
aatvttviaksrltaivslgavgyavalffvlfrapdlaltqlvietisvalfllcfyhl
pkftqkqesvrfhlgnalvslavgmtmsiiaflayagkhfdsisqyyvdntyekaagknm
vnvilvdfrgfdtlfeicvlaiaalgiyamvklrlakeeer

    Sequence, based on observed residues (ATOM records):
    >6z16a (a:)
ptlhiamfapfllallvpffykcirslhvgwfvfplpialfvyflsyiddvrndevirat
mpwipslrisfdayvdglsllfallitgigslvvlysiyylqkgkeplgnfyvylllfmg
amlgvvlsdhlialymfweltsissflliaywfkrdrsrygaqksmlitmfggllmlggf
valaiaggtynirelvhtpltehplfipalvlilfgaftksaqfpfyiwlpdameaptpv
saylhsatmvkagiyviarltpifavssvwvwtvalvglvtlcwasflaskqtdlkaila
ystvsqlglitsllgigglsfhydgmgenvfmvavlaaifhlfnhatfkgslfmvvgivd
hetgtrdirrlgglmtimpitftialigslsmaglppfngflskemfftamlrakdvagw
avilpvvawvasiftflysallvsrtffgtykphvlkkeaheapfgmliapivlaslvvf
igfvpnvlsdsvlapavyavlyglfapnealdvhishwhgftpelfmtigvllfglvlyr
tfpkwkkiyyrlsermslnffydqsfvwmergarsfisrvmngsmrtylmyiftslvall
lftigwheqwhidlsrlahvrvyevvlaigilaatvttviaksrltaivslgavgyaval
ffvlfrapdlaltqlvietisvalfllcfyhlpkftqkqesvrfhlgnalvslavgmtms
iiaflayagkhfdsisqyyvdntyekaagknmvnvilvdfrgfdtlfeicvlaiaalgiy
amvklrla

  • Chain 'b':
    Sequence, based on SEQRES records:
    >6z16b (b:)
mkrndvilrtttavvtpiivlfsvqlffaghyypgggfigglmtagaivllllafdietv
rkmvpinykwlvaigllfavgtgmssmfldrpflthaykyvhlplldhtslhtavlfdlg
vyfvvvgvtmiiietigesd

    Sequence, based on observed residues (ATOM records):
    >6z16b (b:)
rndvilrtttavvtpiivlfsvqlffaghyypgggfigglmtagaivllllafdietvrk
mvpinykwlvaigllfavgtgmssmfldrpflthaykyvhlplldhtslhtavlfdlgvy
fvvvgvtmiiietigesd

  • Chain 'c':
    Sequence, based on SEQRES records:
    >6z16c (c:)
mellmivvigclfaaatylllsksllriiigtgllshgahlllltmgglkagappllgek
asryvdplpqaliltaivisfgvtafflvlayrsyqeigtdhmegmkgd

    Sequence, based on observed residues (ATOM records):
    >6z16c (c:)
mellmivvigclfaaatylllsksllriiigtgllshgahlllltmgglkagappllgek
asryvdplpqaliltaivisfgvtafflvlayrsyqeigtdhmegmk

  • Chain 'd':
    Sequence, based on SEQRES records:
    >6z16d (d:)
msnllllpiviplvtaivliffpkhvfwqrvvslaatvglvvasgallhrvhtdgiqtln
vgnwpapfgitlvsdslsallvlttsiialaclvysfyaighkretfyyysffqflivgv
ngafttgdlfnlfvffevmlmssyvllvlggtkiqlretikytlvnvissalfvvavayl
yavtgtlnmahladrinalgsspiltviavlfiivfglkgaifplyfwlpgayyapptpv
lalfgglltkvgvysilrtftllfthdaaythtllawlalgtiiigvigavayndmryiv
iyniiaavgvmifgisimtpesvegtifyllqdmvmkamlflfvgiifsitrsndirsfs
glitsypllgwaffiaalslagipplsgfigkllivkasfdaqlifeaivillssllvly
svmkifmngfwgekkgfeqkqvdgrlfpvlfllvlsvaygigiefvrpfvldavnvlvdp
smyieavlke

    Sequence, based on observed residues (ATOM records):
    >6z16d (d:)
msnllllpiviplvtaivliffpkhvfwqrvvslaatvglvvasgallhrvhtdgiqtln
vgnwpapfgitlvsdslsallvlttsiialaclvysfyaighkretfyyysffqflivgv
ngafttgdlfnlfvffevmlmssyvllvlggtkiqlretikytlvnvissalfvvavayl
yavtgtlnmahladrinalgsspiltviavlfiivfglkgaifplyfwlpgayyapptpv
lalfgglltkvgvysilrtftllfthdaaythtllawlalgtiiigvigavayndmryiv
iyniiaavgvmifgisimtpesvegtifyllqdmvmkamlflfvgiifsitrsndirsfs
glitsypllgwaffiaalslagipplsgfigkllivkasfdaqlifeaivillssllvly
svmkifmngfwgekkgfeqkqvdgrlfpvlfllvlsvaygigiefvrpfvldavnvlvdp
smyieavlk

  • Chain 'e':
    Sequence; same for both SEQRES and ATOM records:
    >6z16e (e:)
mafqillnvilafvwmfltvsfdgasflvgymiglfilfilrrffhsrfylvpvfviikl
lfiffkelilsniavakvvmqrsltiqpaifalptelkkeweitvlamlitltpgtlvld
vsddgstlyihalnspdvheaiesikqsfektimevsk

  • Chain 'f':
    Sequence, based on SEQRES records:
    >6z16f (f:)
mmlnialvilslamvgflyrvvkgpstadriialdamgitlagivaivsmllntsafldv
illigilafvgtvafakflekgvviergndr

    Sequence, based on observed residues (ATOM records):
    >6z16f (f:)
mlnialvilslamvgflyrvvkgpstadriialdamgitlagivaivsmllntsafldvi
lligilafvgtvafakflekgvviergn

  • Chain 'g':
    Sequence, based on SEQRES records:
    >6z16g (g:)
mssnvgtianalvvvlillgavltllsavgairlpdvytrshaisksttlgimcillgaf
lhffiennhfnsrlllgivfifmtspvaahlisraayyanverwegtvrddlkqkaggk

    Sequence, based on observed residues (ATOM records):
    >6z16g (g:)
ianalvvvlillgavltllsavgairlpdvytrshaisksttlgimcillgaflhffien
nhfnsrlllgivfifmtspvaahlisraayyanverwegtvrdd