PDB entry 6ywo

View 6ywo on RCSB PDB site
Description: cuta in complex with a3 rna
Deposited on 2020-04-29, released 2020-08-05
The last revision was dated 2020-09-30, with a file datestamp of 2020-09-25.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: CutA
    Species: Thermothielavioides terrestris NRRL 8126 [TaxId:578455]
    Gene: THITE_2112714
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: CutA
    Species: Thermothielavioides terrestris NRRL 8126 [TaxId:578455]
    Gene: THITE_2112714
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: CutA
    Species: Thermothielavioides terrestris NRRL 8126 [TaxId:578455]
    Gene: THITE_2112714
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: CutA
    Species: Thermothielavioides terrestris NRRL 8126 [TaxId:578455]
    Gene: THITE_2112714
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: RNA (5'-r(*ap*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'F':
    Compound: RNA (5'-r(*ap*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'I':
    Compound: RNA (5'-r(*ap*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'K':
    Compound: RNA (5'-r(*ap*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: CL, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ywoA (A:)
etaipfsrrrmpyslgtdklekvdpdkiksklsedverkletdmrelydrllpteaievn
rrelvsklerlfntewpghdirvhlfgssgnllcsddsdvdicittpwrelesvcmiael
ldrhgmekvvcvssakvpivkiwdpelklacdmnvnntlalentrmvrtyvsiddrvrpl
amiikywtrrrvvndaafggtlssytwicmiiaflqlrdppvlpalhqqhdlklvkqdga
lsdfaddipklrgfgaknkdslavllfqffrfyahefdydkytlsirmgtlltkaeknwq
ylvnnalcveepfndgrnlgntadetsfrglhmelrrafdliaegkleecceqyvfpkee
erv

    Sequence, based on observed residues (ATOM records):
    >6ywoA (A:)
pfsrrrmpyslgtdklekvdpdkiksklsedverkletdmrelydrllpteaievnrrel
vsklerlfntewpghdirvhlfgssgnllcsddsdvdicittpwrelesvcmiaelldrh
gmekvvcvssakvpivkiwdpelklacdmnvnntlalentrmvrtyvsiddrvrplamii
kywtrrrvvndaafggtlssytwicmiiaflqlrdppvlpalhqqhdlklvkqdgalsdf
addipklrgfgaknkdslavllfqffrfyahefdydkytlsirmgtlltkaeknwqylvn
nalcveepfndgrnlgntadetsfrglhmelrrafdliaegkleecceqyvfpk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ywoB (B:)
etaipfsrrrmpyslgtdklekvdpdkiksklsedverkletdmrelydrllpteaievn
rrelvsklerlfntewpghdirvhlfgssgnllcsddsdvdicittpwrelesvcmiael
ldrhgmekvvcvssakvpivkiwdpelklacdmnvnntlalentrmvrtyvsiddrvrpl
amiikywtrrrvvndaafggtlssytwicmiiaflqlrdppvlpalhqqhdlklvkqdga
lsdfaddipklrgfgaknkdslavllfqffrfyahefdydkytlsirmgtlltkaeknwq
ylvnnalcveepfndgrnlgntadetsfrglhmelrrafdliaegkleecceqyvfpkee
erv

    Sequence, based on observed residues (ATOM records):
    >6ywoB (B:)
fsrrrmpyslgtdklekvdpdkiksklsedverkletdmrelydrllpteaievnrrelv
sklerlfntewpghdirvhlfgssgnllcsddsdvdicittpwrelesvcmiaelldrhg
mekvvcvssakvpivkiwdpelklacdmnvnntlalentrmvrtyvsiddrvrplamiik
ywtrrrvvndaafggtlssytwicmiiaflqlrdppvlpalhqqhdlklvkqdgalsdfa
ddipklrgfgaknkdslavllfqffrfyahefdydkytlsirmgtlltkaeknwqylvnn
alcveepfndgrnlgntadetsfrglhmelrrafdliaegkleecceqyvfpk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ywoC (C:)
etaipfsrrrmpyslgtdklekvdpdkiksklsedverkletdmrelydrllpteaievn
rrelvsklerlfntewpghdirvhlfgssgnllcsddsdvdicittpwrelesvcmiael
ldrhgmekvvcvssakvpivkiwdpelklacdmnvnntlalentrmvrtyvsiddrvrpl
amiikywtrrrvvndaafggtlssytwicmiiaflqlrdppvlpalhqqhdlklvkqdga
lsdfaddipklrgfgaknkdslavllfqffrfyahefdydkytlsirmgtlltkaeknwq
ylvnnalcveepfndgrnlgntadetsfrglhmelrrafdliaegkleecceqyvfpkee
erv

    Sequence, based on observed residues (ATOM records):
    >6ywoC (C:)
srrrmpyslgtdklekvdpdkiksklsedverkletdmrelydrllpteaievnrrelvs
klerlfntewpghdirvhlfgssgnllcsddsdvdicittpwrelesvcmiaelldrhgm
ekvvcvssakvpivkiwdpelklacdmnvnntlalentrmvrtyvsiddrvrplamiiky
wtrrrvvndaafggtlssytwicmiiaflqlrdppvlpalhqqhdlklvalsdfaddipk
lrgfgaknkdslavllfqffrfyahefdydkytlsirmgtlltkaeknwqylvnnalcve
epfndgrnlgntadetsfrglhmelrrafdliaegkleecceqyvfp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ywoD (D:)
etaipfsrrrmpyslgtdklekvdpdkiksklsedverkletdmrelydrllpteaievn
rrelvsklerlfntewpghdirvhlfgssgnllcsddsdvdicittpwrelesvcmiael
ldrhgmekvvcvssakvpivkiwdpelklacdmnvnntlalentrmvrtyvsiddrvrpl
amiikywtrrrvvndaafggtlssytwicmiiaflqlrdppvlpalhqqhdlklvkqdga
lsdfaddipklrgfgaknkdslavllfqffrfyahefdydkytlsirmgtlltkaeknwq
ylvnnalcveepfndgrnlgntadetsfrglhmelrrafdliaegkleecceqyvfpkee
erv

    Sequence, based on observed residues (ATOM records):
    >6ywoD (D:)
rrrmpyslgtdklekvdpdkiksklsedverkletdmrelydrllpteaievnrrelvsk
lerlfntewpghdirvhlfgssgnllcsddsdvdicittpwrelesvcmiaelldrhgme
kvvcvssakvpivkiwdpelklacdmnvnntlalentrmvrtyvsiddrvrplamiikyw
trrrvvndaafggtlssytwicmiiaflqlrdppvlpalhqqhdlklvkqdgalsdfadd
ipklrgfgaknkdslavllfqffrfyahefdydkytlsirmgtlltkaeknwqylvnnal
cveepfndgrnlgntadetsfrglhmelrrafdliaegkleecceqyvfp

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'K':
    No sequence available.