PDB entry 6yvb

View 6yvb on RCSB PDB site
Description: arabidopsis aspartate transcarbamoylase complex with carbamoyl phosphate
Deposited on 2020-04-28, released 2021-03-03
The last revision was dated 2021-03-03, with a file datestamp of 2021-02-26.
Experiment type: XRAY
Resolution: 1.83 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: pyrb
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: AXX17_At3g21670
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A178VJE3 (23-331)
      • expression tag (21-22)
  • Chain 'B':
    Compound: pyrb
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: AXX17_At3g21670
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A178VJE3 (23-331)
      • expression tag (20-22)
  • Chain 'C':
    Compound: pyrb
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: AXX17_At3g21670
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A178VJE3 (23-331)
      • expression tag (8-22)
  • Chain 'D':
    Compound: pyrb
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: AXX17_At3g21670
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A178VJE3 (23-331)
      • expression tag (7-9)
      • expression tag (11-22)
  • Chain 'E':
    Compound: pyrb
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: AXX17_At3g21670
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A178VJE3 (23-331)
      • expression tag (20-22)
  • Chain 'F':
    Compound: pyrb
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: AXX17_At3g21670
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A178VJE3 (23-331)
      • expression tag (21-22)
  • Heterogens: CP, GOL, ACT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6yvbA (A:)
mgsshhhhhhssglevlfqgphmfelsdviegkqfdremlsaifdvaremekieksssqs
eilkgylmatlfyepstrtrlsfesamkrlggevlttenarefssaakgetledtirtve
gysdiivmrhfesgaarkaaatanipvinagdgpgehptqalldvytiqseigkldgisv
alvgdlangrtvrslayllakfkdvkiyfvspeivkmkddikdyltssgveweessdlme
vaskcdvvyqtriqrerfgerldlyeaargkfivdkdllgvmqkkaiimhplprldeita
dvdadpraayfrqaknglfirmallklllvgw

    Sequence, based on observed residues (ATOM records):
    >6yvbA (A:)
hmfelsdviegkqfdremlsaifdvaremekieksssqseilkgylmatlfyepstrtrl
sfesamkrlggevlttenarefssaakgetledtirtvegysdiivmrhfesgaarkaaa
tanipvinagdgpgehptqalldvytiqseigkldgisvalvgdlangrtvrslayllak
fkdvkiyfvspeivkmkddikdyltssgveweessdlmevaskcdvvyqtriqrerfger
ldlyeaargkfivdkdllgvmqkkaiimhplprldeitadvdadpraayfrqaknglfir
mallklllvgw

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6yvbB (B:)
mgsshhhhhhssglevlfqgphmfelsdviegkqfdremlsaifdvaremekieksssqs
eilkgylmatlfyepstrtrlsfesamkrlggevlttenarefssaakgetledtirtve
gysdiivmrhfesgaarkaaatanipvinagdgpgehptqalldvytiqseigkldgisv
alvgdlangrtvrslayllakfkdvkiyfvspeivkmkddikdyltssgveweessdlme
vaskcdvvyqtriqrerfgerldlyeaargkfivdkdllgvmqkkaiimhplprldeita
dvdadpraayfrqaknglfirmallklllvgw

    Sequence, based on observed residues (ATOM records):
    >6yvbB (B:)
phmfelsdviegkqfdremlsaifdvaremekieksssqseilkgylmatlfyepstrtr
lsfesamkrlggevlttenarefssaakgetledtirtvegysdiivmrhfesgaarkaa
atanipvinagdgpgehptqalldvytiqseigkldgisvalvgdlangrtvrslaylla
kfkdvkiyfvspeivkmkddikdyltssgveweessdlmevaskcdvvyqtriqrerfge
rldlyeaargkfivdkdllgvmqkkaiimhplprldeitadvdadpraayfrqaknglfi
rmallklllvgw

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6yvbC (C:)
mgsshhhhhhssglevlfqgphmfelsdviegkqfdremlsaifdvaremekieksssqs
eilkgylmatlfyepstrtrlsfesamkrlggevlttenarefssaakgetledtirtve
gysdiivmrhfesgaarkaaatanipvinagdgpgehptqalldvytiqseigkldgisv
alvgdlangrtvrslayllakfkdvkiyfvspeivkmkddikdyltssgveweessdlme
vaskcdvvyqtriqrerfgerldlyeaargkfivdkdllgvmqkkaiimhplprldeita
dvdadpraayfrqaknglfirmallklllvgw

    Sequence, based on observed residues (ATOM records):
    >6yvbC (C:)
hhssglevlfqgphmfelsdviegkqfdremlsaifdvaremekieksssqseilkgylm
atlfyepstrtrlsfesamkrlggevlttenarefssaakgetledtirtvegysdiivm
rhfesgaarkaaatanipvinagdgpgehptqalldvytiqseigkldgisvalvgdlan
grtvrslayllakfkdvkiyfvspeivkmkddikdyltssgveweessdlmevaskcdvv
yqtriqrerfgerldlyeaargkfivdkdllgvmqkkaiimhplprldeitadvdadpra
ayfrqaknglfirmallklllvgw

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6yvbD (D:)
mgsshhhhhhssglevlfqgphmfelsdviegkqfdremlsaifdvaremekieksssqs
eilkgylmatlfyepstrtrlsfesamkrlggevlttenarefssaakgetledtirtve
gysdiivmrhfesgaarkaaatanipvinagdgpgehptqalldvytiqseigkldgisv
alvgdlangrtvrslayllakfkdvkiyfvspeivkmkddikdyltssgveweessdlme
vaskcdvvyqtriqrerfgerldlyeaargkfivdkdllgvmqkkaiimhplprldeita
dvdadpraayfrqaknglfirmallklllvgw

    Sequence, based on observed residues (ATOM records):
    >6yvbD (D:)
hhhsglevlfqgphmfelsdviegkqfdremlsaifdvaremekieksssqseilkgylm
atlfyepstrtrlsfesamkrlggevlttenarefgetledtirtvegysdiivmrhfes
gaarkaaatanipvinagdgpgehptqalldvytiqseigkldgisvalvgdlangrtvr
slayllakfkdvkiyfvspeivkmkddikdyltssgveweessdlmevaskcdvvyqtri
qrerfgerldlyeaargkfivdkdllgvmqkkaiimhplprldeitadvdadpraayfrq
aknglfirmallklllvgw

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6yvbE (E:)
mgsshhhhhhssglevlfqgphmfelsdviegkqfdremlsaifdvaremekieksssqs
eilkgylmatlfyepstrtrlsfesamkrlggevlttenarefssaakgetledtirtve
gysdiivmrhfesgaarkaaatanipvinagdgpgehptqalldvytiqseigkldgisv
alvgdlangrtvrslayllakfkdvkiyfvspeivkmkddikdyltssgveweessdlme
vaskcdvvyqtriqrerfgerldlyeaargkfivdkdllgvmqkkaiimhplprldeita
dvdadpraayfrqaknglfirmallklllvgw

    Sequence, based on observed residues (ATOM records):
    >6yvbE (E:)
phmfelsdviegkqfdremlsaifdvaremekieksssqseilkgylmatlfyepstrtr
lsfesamkrlggevlttenarefssaakgetledtirtvegysdiivmrhfesgaarkaa
atanipvinagdgpgehptqalldvytiqseigkldgisvalvgdlangrtvrslaylla
kfkdvkiyfvspeivkmkddikdyltssgveweessdlmevaskcdvvyqtriqrerfge
rldlyeaargkfivdkdllgvmqkkaiimhplprldeitadvdadpraayfrqaknglfi
rmallklllvgw

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6yvbF (F:)
mgsshhhhhhssglevlfqgphmfelsdviegkqfdremlsaifdvaremekieksssqs
eilkgylmatlfyepstrtrlsfesamkrlggevlttenarefssaakgetledtirtve
gysdiivmrhfesgaarkaaatanipvinagdgpgehptqalldvytiqseigkldgisv
alvgdlangrtvrslayllakfkdvkiyfvspeivkmkddikdyltssgveweessdlme
vaskcdvvyqtriqrerfgerldlyeaargkfivdkdllgvmqkkaiimhplprldeita
dvdadpraayfrqaknglfirmallklllvgw

    Sequence, based on observed residues (ATOM records):
    >6yvbF (F:)
hmfelsdviegkqfdremlsaifdvaremekieksssqseilkgylmatlfyepstrtrl
sfesamkrlggevlttenarefssaakgetledtirtvegysdiivmrhfesgaarkaaa
tanipvinagdgpgehptqalldvytiqseigkldgisvalvgdlangrtvrslayllak
fkdvkiyfvspeivkmkddikdyltssgveweessdlmevaskcdvvyqtriqrerfger
ldlyeaargkfivdkdllgvmqkkaiimhplprldeitadvdadpraayfrqaknglfir
mallklllvgw