PDB entry 6ymr

View 6ymr on RCSB PDB site
Description: Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin
Class: hydrolase
Keywords: Phosphoramidate Inhibitor, Protease, HYDROLASE
Deposited on 2020-04-09, released 2021-04-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-04-21, with a file datestamp of 2021-04-16.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'E':
    Compound: thermolysin
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Gene: nprS, nprM
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ymre_
  • Heterogens: OZE, ZN, CA, DMS, HOH

PDB Chain Sequences:

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6ymrE (E:)
itgtstvgvgrgvlgdqkninttystyyylqdntrgngiftydakyrttlpgslwadadn
qffasydapavdahyyagvtydyyknvhnrlsydgnnaairssvhysqgynnafwngsqm
vygdgdgqtfiplsggidvvahelthavtdytagliyqnesgaineaisdifgtlvefya
nknpdweigedvytpgisgdslrsmsdpakygdpdhyskrytgtqdnggvhinsgiinka
aylisqggthygvsvvgigrdklgkifyraltqyltptsnfsqlraaavqsatdlygsts
qevasvkqafdavgvk