PDB entry 6ylt

View 6ylt on RCSB PDB site
Description: Translation initiation factor 4E in complex with 3-MeBn7GpppG mRNA 5' cap analog
Class: translation
Keywords: cap analog, translation initiation factor, 3-MeBn7GpppG, protein-ligand complex, eIF4E, TRANSLATION
Deposited on 2020-04-07, released 2020-04-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-04-29, with a file datestamp of 2020-04-24.
Experiment type: XRAY
Resolution: 2.67 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: eukaryotic translation initiation factor 4e
    Species: Mus musculus [TaxId:10090]
    Gene: eif4e
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ylta_
  • Chain 'B':
    Compound: eukaryotic translation initiation factor 4e
    Species: Mus musculus [TaxId:10090]
    Gene: eif4e
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6yltb_
  • Chain 'C':
    Compound: eukaryotic translation initiation factor 4e
    Species: Mus musculus [TaxId:10090]
    Gene: eif4e
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6yltc_
  • Chain 'D':
    Compound: eukaryotic translation initiation factor 4e
    Species: Mus musculus [TaxId:10090]
    Gene: eif4e
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6yltd_
  • Heterogens: P3E, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6yltA (A:)
mvanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlm
pgcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddys
ddvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatk
sgsttknrfvv

    Sequence, based on observed residues (ATOM records): (download) 
    >6yltA (A:)
pehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcd
yslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvc
gavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtaknrfvv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6yltB (B:)
mvanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlm
pgcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddys
ddvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatk
sgsttknrfvv

    Sequence, based on observed residues (ATOM records): (download) 
    >6yltB (B:)
npehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgc
dyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddv
cgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtattknr
fvv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6yltC (C:)
mvanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlm
pgcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddys
ddvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatk
sgsttknrfvv

    Sequence, based on observed residues (ATOM records): (download) 
    >6yltC (C:)
ehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcdy
slfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvcg
avvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtattknrfv
v

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6yltD (D:)
mvanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlm
pgcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddys
ddvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatk
sgsttknrfvv

    Sequence, based on observed residues (ATOM records): (download) 
    >6yltD (D:)
pehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcd
yslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvc
gavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtattknrf
vv