PDB entry 6ylr

View 6ylr on RCSB PDB site
Description: Translation initiation factor 4E in complex with bn7GpppG mRNA 5' cap analog
Class: translation
Keywords: cap analog, translation initiation, N7-benzyl dinucleotide, TRANSLATION
Deposited on 2020-04-07, released 2020-04-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-04-15, with a file datestamp of 2020-04-10.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: eukaryotic translation initiation factor 4e
    Species: Mus musculus [TaxId:10090]
    Gene: eif4e
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ylra_
  • Chain 'B':
    Compound: eukaryotic translation initiation factor 4e
    Species: Mus musculus [TaxId:10090]
    Gene: eif4e
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ylrb_
  • Heterogens: OYE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ylrA (A:)
mvanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlm
pgcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddys
ddvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatk
sgsttknrfvv

    Sequence, based on observed residues (ATOM records): (download) 
    >6ylrA (A:)
ehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcdy
slfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvcg
avvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatksttkn
rfvv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6ylrB (B:)
mvanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlm
pgcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddys
ddvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatk
sgsttknrfvv

    Sequence, based on observed residues (ATOM records): (download) 
    >6ylrB (B:)
anpehyikhplqnrwalwffkktwqanlrliskfdtvedfwalynhiqlssnlmpgcdys
lfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvcga
vvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshad