PDB entry 6yhm

View 6yhm on RCSB PDB site
Description: Crystal structure of the C-terminal domain of CNFy from Yersinia pseudotuberculosis
Class: toxin
Keywords: toxin, CNF, cytotoxic necrotizing factor, deamidase, RhoA modification, RhoA activation, putative ADP-ribosyltransferase
Deposited on 2020-03-30, released 2020-12-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-24, with a file datestamp of 2021-02-19.
Experiment type: XRAY
Resolution: 1.13 Å
R-factor: N/A
AEROSPACI score: 0.78 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cytotoxic necrotizing factor
    Species: Yersinia pseudotuberculosis [TaxId:633]
    Gene: cnf
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6yhma1, d6yhma2
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6yhmA (A:)
gshmnvaeissinfrrlnsgninvlkgrgvfssrrlreiylrfdaanadelrpgdvyvkk
tkfdsmgydshfynegigingaptlntytgeyvadsssqgatywlkynltnetsiikvsn
sargangikialeeieenkpvvitsgtltgctvvfarkgeyfyavhtgnsesligftsts
gvakaievlsslselevpalpdvinnntlveylsdnfdsalisysssslkpnsminisre
nvstfsyytddiqlpsfgtsvtilvrtndntvvrslsesytmnsnsskmvvfnvlqkdf

    Sequence, based on observed residues (ATOM records): (download) 
    >6yhmA (A:)
mnvaeissinfrrlnsgninvlkgrgvfssrrlreiylrfdaanadelrpgdvyvkktkf
dsmgydshfynegigingaptlntytgeyvadsssqgatywlkynltnetsiikvsnsar
gangikialeeieenkpvvitsgtltgctvvfarkgeyfyavhtgnsesligftstsgva
kaievlsslselevpalpdvinnntlveylsdnfdsalisysssslkpnsminisrenvs
tfsyytddiqlpsfgtsvtilvrtndntvvrslsesytmnskmvvfnvlqkdf