PDB entry 6ygp

View 6ygp on RCSB PDB site
Description: TGT WT labelled mit 5F-Trp crystallised at pH 5.5
Class: transferase
Keywords: transferase, tgt, tRNA-guanine transglycosylase, guanine insertion enzyme, homodimer, 19f-nmr, 5f-trp
Deposited on 2020-03-27, released 2020-04-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-04-08, with a file datestamp of 2020-04-03.
Experiment type: XRAY
Resolution: 1.33 Å
R-factor: N/A
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Queuine tRNA-ribosyltransferase
    Species: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 [TaxId:264203]
    Gene: tgt, ZMO0363
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28720
      • engineered mutation (313)
    Domains in SCOPe 2.08: d6ygpa_
  • Heterogens: GOL, ZN, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ygpA (A:)
gsmveataqetdrprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpet
vratgadiilgntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqs
eegvtfkshldgsrhmlspersieiqhllgsdivmafdectpypatpsraassmersmrw
akrsrdafdsrkeqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqd
emfrvldfsvpmlpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdg
pinirnarfsedlkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlm
qkirdsisegrfsqfaqdfraryfarns

    Sequence, based on observed residues (ATOM records): (download) 
    >6ygpA (A:)
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfksmlsp
ersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaa
lfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkph
ylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldse
chcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdf
raryfa