PDB entry 6ygm

View 6ygm on RCSB PDB site
Description: TGT W95F mutant labelled mit 5F-Trp crystallised at pH 5.5
Class: transferase
Keywords: transferase, tgt, tRNA-guanine transglycosylase, guanine insertion enzyme, homodimer, 19f-nmr, 5f-trp
Deposited on 2020-03-27, released 2020-04-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-04-08, with a file datestamp of 2020-04-03.
Experiment type: XRAY
Resolution: 1.23 Å
R-factor: N/A
AEROSPACI score: 0.63 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Queuine tRNA-ribosyltransferase
    Species: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) [TaxId:264203]
    Gene: tgt, ZMO0363
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28720
      • engineered mutation (96)
      • engineered mutation (313)
    Domains in SCOPe 2.08: d6ygma_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ygmA (A:)
gsmveataqetdrprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpet
vratgadiilgntyhlmlrpgaeriaklgglhsfmgfdrpiltdsggyqvmslssltkqs
eegvtfkshldgsrhmlspersieiqhllgsdivmafdectpypatpsraassmersmrw
akrsrdafdsrkeqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqd
emfrvldfsvpmlpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdg
pinirnarfsedlkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlm
qkirdsisegrfsqfaqdfraryfarns

    Sequence, based on observed residues (ATOM records): (download) 
    >6ygmA (A:)
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtadiilgntyhlmlrpgaeriakl
gglhsfmgfdrpiltdsggyqvmsltkqseegvtfkshldgsrhmlspersieiqhllgs
divmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaalfgiqqgsvfen
lrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphylmgvgkpddiv
gavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsechcavcqkwsra
yihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfraryfarn