PDB entry 6ygc

View 6ygc on RCSB PDB site
Description: crystal structure of the natc complex bound to arl3 peptide and coa
Deposited on 2020-03-27, released 2020-10-28
The last revision was dated 2020-11-18, with a file datestamp of 2020-11-13.
Experiment type: XRAY
Resolution: 2.99 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: N-alpha-acetyltransferase 30
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MAK3, NAA30, YPR051W, YP9499.08
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: N-alpha-acetyltransferase 35, NatC auxiliary subunit
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MAK10, NAA35, YEL053C
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q02197 (2-End)
      • expression tag (1)
  • Chain 'C':
    Compound: N-alpha-acetyltransferase 38, NatC auxiliary subunit
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MAK31, NAA38, YCR020C-A, YCR20C-A
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: ADP-ribosylation factor-like protein 3
    Species: SACCHAROMYCES CEREVISIAE, synthetic [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: COA, CL, GOL, IOD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6ygcA (A:)
meivykpldirneeqfasikklidadlsepysiyvyryflnqwpeltyiavdnksgtpni
pigcivckmdphrnvrlrgyigmlavestyrghgiakklveiaidkmqrehcdeimlete
vensaalnlyegmgfirmkrmfryylnegdafklilplt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ygcB (B:)
gpmevdsilgslsitddfdqlvdvtslfdelcsklkpeaivkdprfdlfegthslevnns
kldsslieltaeeiefdvnvaydpplasvaaiadrllrcviswlndyqtlpttvlscryt
esllsslvkgttagsswctgnilydkvlgscilgvcyltkfvqkllsagivfeeedlnfn
nmgfntfdnlpgqdvvinslteslqileaysddslhltmlkhilkiiiclvhledhltdy
stktshldelienansvngifpqlqlsppkgafstyiqkhrsnqfpprkitklptdysgf
itlandvktillvdkaesaletyqfakffnkleqrhviarilfplffirddrtvlgkfsy
tqfyllhvkefsaqtpsefessigneliqessnmllewyqncsqntcryrqgfnrqlilw
dslqaqfesvnsqvycswtyfmklssmiefslkgfdldiykpfeaysmfwyvyylshhle
tflkdsqndiesninaihsmnkklkklkagekkdqlrlkyrfamdnemeqlqatkqflny
llkeinitkslclievfqfailksfglidnknstpskfsnerlihnlrfkpfnsigvpel
peyevfqqtlkdfvieekgaafdikleratnfietevrnvvssideimqgikggdnngvl
vtgtrlvqelsleyycklkhtskalsvnskvivntlkkniknkdsheykvelvhttegwn
yfpiqtlrikqdryk

    Sequence, based on observed residues (ATOM records):
    >6ygcB (B:)
pmevdsilgslsitddfdqlvdvtslfdelcsklkpeaivkdprfdlfegthslevnnsk
ldsslieltaeeiefdvnvaydpplasvaaiadrllrcviswlndyqtlpttvlscryte
sllsslvksswctgnilydkvlgscilgvcyltkfvqkllsagivfeeedlnfnnmgfnt
fdnlpgqdvvinslteslqileaysddslhltmlkhilkiiiclvhledhltdystktsh
ldelienansvngifpqlqlsppkgafstyiqkhrsnqfpprkitklptdysgfitland
vktillvdkaesaletyqfakffnkleqrhviarilfplffirddrtvlgkfsytqfyll
hvkefsaqtpgneliqessnmllewyqncsqntcryrqgfnrqlilwdslqaqfesvnsq
vycswtyfmklssmiefslkgfdldiykpfeaysmfwyvyylshhletflkdsqndiesn
inaihsmnkklkklkagekkdqlrlkyrfamdnemeqlqatkqflnyllkeinitkslcl
ievfqfailksfglidnknstpskfsnerlihnlrfkpfnsigvpelpeyevfqqtlkdf
vieekgaafdikleratnfietevrnvvssideimqgikggdnngvlvtgtrlvqelsle
yycklkhtskalsvnskvivntlkkniknkdsheykvelvhttegwnyfpiqtlrikqdr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ygcC (C:)
mdilklsdfigntlivsltedrilvgslvavdaqmnllldhveermgsssrmmglvsvpr
rsvktimidkpvlqelt

    Sequence, based on observed residues (ATOM records):
    >6ygcC (C:)
lklsdfigntlivsltedrilvgslvavdaqmnllldhveermgsssrmmglvsvprrsv
ktimidkpvlqelt

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ygcD (D:)
mfhlvgsrrr

    Sequence, based on observed residues (ATOM records):
    >6ygcD (D:)
mfhl