PDB entry 6yd9

View 6yd9 on RCSB PDB site
Description: Ecoli GyrB24 with inhibitor 16a
Class: DNA binding protein
Keywords: DNA gyrase, topoisomerase IV, inhibitor, DNA BINDING PROTEIN
Deposited on 2020-03-20, released 2020-12-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-07-14, with a file datestamp of 2021-07-09.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA gyrase subunit b
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: gyrB, acrB, cou, himB, hisU, nalC, parA, pcbA, b3699, JW5625
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6yd9a_
  • Heterogens: ON2, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6yd9A (A:)
msnsydsssikvlkgldavrkrpgmyigdtddgtglhhmvfevvdnaidealaghckeii
vtihadnsvsvqddgrgiptgihpeegvsaaevimtvlhaggkfddnsykvsgglhgvgv
svvnalsqklelviqregkihrqiyehgvpqaplavtgetektgtmvrfwpsletftnvt
efeyeilakrlrelsflnsgvsirlrdkrdgkedhfhyeg

    Sequence, based on observed residues (ATOM records): (download) 
    >6yd9A (A:)
sydsssikvlkgldavrkrpgmyigdtddgtglhhmvfevvdnaidealaghckeiivti
hadnsvsvqddgrgiptgihpeegvsaaevimtvlhgvgvsvvnalsqklelviqregki
hrqiyehgvpqaplavtgetektgtmvrfwpsletftnvtefeyeilakrlrelsflnsg
vsirlrdkrdgkedhfhy