PDB entry 6ycd

View 6ycd on RCSB PDB site
Description: Structure the ananain protease from Ananas comosus covalently bound to the TLCK inhibitor
Class: hydrolase
Keywords: cysteine protease, stem bromelain protein, HYDROLASE
Deposited on 2020-03-18, released 2020-11-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-11-25, with a file datestamp of 2020-11-20.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: N/A
AEROSPACI score: 0.63 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ananain
    Species: Ananas comosus [TaxId:4615]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ycda_
  • Chain 'B':
    Compound: Ananain
    Species: Ananas comosus [TaxId:4615]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ycdb_
  • Heterogens: TCK, SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ycdA (A:)
vpqsidwrdsgavtsvknqgrcgscwafasiatvesiykikrgnlvslseqqvldcavsy
gckggwinkaysfiisnkgvasaaiypykaakgtcktngvpnsayitrytyvqrnnernm
myavsnqpiaaaldasgnfqhykrgvftgpcgtrlnhaiviigygqdssgkkfwivrnsw
gagwgeggyirlardvsssfglcgiamdplyptlqs

    Sequence, based on observed residues (ATOM records): (download) 
    >6ycdA (A:)
vpqsidwrdsgavtsvknqgrcgscwafasiatvesiykikrgnlvslseqqvldcavsy
gckggwinkaysfiisnkgvasaaiypykaakgtcktngvpnsayitrytyvqrnnernm
myavsnqpiaaaldasgnfqhykrgvftgpcgtrlnhaiviigygqdssgkkfwivrnsw
gagwgeggyirlardvsssfglcgiamdplyptlq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6ycdB (B:)
vpqsidwrdsgavtsvknqgrcgscwafasiatvesiykikrgnlvslseqqvldcavsy
gckggwinkaysfiisnkgvasaaiypykaakgtcktngvpnsayitrytyvqrnnernm
myavsnqpiaaaldasgnfqhykrgvftgpcgtrlnhaiviigygqdssgkkfwivrnsw
gagwgeggyirlardvsssfglcgiamdplyptlqs

    Sequence, based on observed residues (ATOM records): (download) 
    >6ycdB (B:)
vpqsidwrdsgavtsvknqgrcgscwafasiatvesiykikrgnlvslseqqvldcavsy
gckggwinkaysfiisnkgvasaaiypykaakgtcktngvpnsayitrytyvqrnnernm
myavsnqpiaaaldasgnfqhykrgvftgpcgtrlnhaiviigygqdssgkkfwivrnsw
gagwgeggyirlardvsssfglcgiamdplyptlq