PDB entry 6ybt

View 6ybt on RCSB PDB site
Description: structure of a human 48s translational initiation complex - eif3bgi
Deposited on 2020-03-17, released 2020-09-16
The last revision was dated 2020-09-16, with a file datestamp of 2020-09-11.
Experiment type: EM
Resolution: 6 Å
R-factor: N/A
AEROSPACI score: 0 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: Eukaryotic translation initiation factor 3 subunit B
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain '2':
    Compound: eukaryotic translation initiation factor 3 subunit I
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'u':
    Compound: Eukaryotic translation initiation factor 3 subunit A
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '1':
    Sequence, based on SEQRES records:
    >6ybt1 (1:)
mqdaenvavpeaaeeraepgqqqpaaepppaegllrpagpgapeaagteasseevgiaea
gpesevrtepaaeaeaasgpsespsppaaeelpgshaeppvpaqgeapgeqardersdsr
aqavsedaggnegraaeaepralengdadepsfsdpedfvddvseeellgdvlkdrpqea
dgidsvivvdnvpqvgpdrleklknvihkifskfgkitndfypeedgktkgyifleyasp
ahavdavknadgykldkqhtfrvnlftdfdkymtisdewdipekqpfkdlgnlrywleea
ecrdqysvifesgdrtsifwndvkdpvsieerarwtetyvrwspkgtylatfhqrgialw
ggekfkqiqrfshqgvqlidfspcerylvtfsplmdtqddpqaiiiwdiltghkkrgfhc
essahwpifkwshdgkffarmtldtlsiyetpsmglldkkslkisgikdfswspggniia
fwvpedkdiparvtlmqlptrqeirvrnlfnvvdcklhwqkngdylcvkvdrtpkgtqgv
vtnfeifrmrekqvpvdvvemketiiafawepngskfavlhgeaprisvsfyhvknngki
elikmfdkqqantifwspqgqfvvlaglrsmngalafvdtsdctvmniaehymasdvewd
ptgryvvtsvswwshkvdnaywlwtfqgrllqknnkdrfcqllwrprpptllsqeqikqi
kkdlkkyskifeqkdrlsqskaskelverrrtmmedfrkyrkmaqelymeqknerlelrg
gvdtdeldsnvddweeetieffvteeiiplgnqe

    Sequence, based on observed residues (ATOM records):
    >6ybt1 (1:)
gdvlkdrpqeadgidsvivvdnvpqvgpdrleklknvihkifskfgkitndfypeedgkt
kgyifleyaspahavdavknadgykldkqhtfrvnlftdfdkymtisdewdipekqpfkd
lgnlrywleeaecrdqysvifesgdrtsifwndvkdpvsieerarwtetyvrwspkgtyl
atfhqrgialwggekfkqiqrfshqgvqlidfspcerylvtfsplmdtqddpqaiiiwdi
ltghkkrgfhcessahwpifkwshdgkffarmtldtlsiyetpsmglldkkslkisgikd
fswspggniiafwvpedkdiparvtlmqlptrqeirvrnlfnvvdcklhwqkngdylcvk
vdrvvtnfeifrmrekqvpvdvvemketiiafawepngskfavlhgeaprisvsfyhvkn
ngkielikmfdkqqantifwspqgqfvvlaglrsmngalafvdtsdctvmniaehymasd
vewdptgryvvtsvswwshkvdnaywlwtfqgrllqknnkdrfcqllwrprpptllsqeq
ikqikkdlkkyskifeqkdrlsqskaskelverrrtmmedfrkyrkma

  • Chain '2':
    Sequence, based on SEQRES records:
    >6ybt2 (2:)
mkpillqghersitqikynregdllftvakdpivnvwysvngerlgtymghtgavwcvda
dwdtkhvltgsadnscrlwdcetgkqlallktnsavrtcgfdfggniimfstdkqmgyqc
fvsffdlrdpsqidnnepymkipcndskitsavwgplgeciiaghesgelnqysaksgev
lvnvkehsrqindiqlsrdmtmfvtaskdntaklfdsttlehqktfrterpvnsaalspn
ydhvvlgggqeamdvtttstrigkfearffhlafeeefgrvkghfgpinsvafhpdgksy
ssggedgyvrihyfdpqyfefefea

    Sequence, based on observed residues (ATOM records):
    >6ybt2 (2:)
mkpillqghersitqikynregdllftvakdpivnvwysvngerlgtymghtgavwcvda
dwdtkhvltgsadnscrlwdcetgkqlallktnsavrtcgfdfggniimfstfvsffdlr
dpsqidnnepymkipcndskitsavwgplgeciiaghesgelnqysaksgevlvnvkehs
rqindiqlsrdmtmfvtaskdntaklfdsttlehqktfrterpvnsaalspnydhvvlgg
gqeamdvtttstrigkfearffhlafeeefgrvkghfgpinsvafhpdgksyssggedgy
vrih

  • Chain 'u':
    Sequence, based on SEQRES records:
    >6ybtu (u:)
dvmkskkhrtwqkihepimlkylelcvdlrkshlakeglyqyknicqqvniksledvvra
ylkmaeekteaakeesqqmvldiedldniqtpesvllsavsgedtqdrtdrllltpwvkf
lwesyrqcldllrnnsrverlyhdiaqqafkfclqytrkaefrklcdnlrmhlsqiqrhh
nqstainlnnpesqsmhletrlvqldsaismelwqeafkavedihglfslskkppkpqlm
anyynkvstvfwksgnalfhastlhrlyhlsremrknltqdemqrmstrvllatlsipit
pertdiarlldmdgiivekqrrlatllglqapptriglindmvrfnvlqyvvpevkdlyn
wlevefnplklcervtkvlnwvreqpekepelqqyvpqlqnntilrllqqvsqiyqsief
srltslvpfvdafqleraivdaarhcdlqvridhtsrtlsfgsdlnyatredapigphlq
smpseqirnqltamssvlakalevikpahilqekeeqhqlavtaylknsrkehqrilarr
qtieerkerleslniqrekeeleqreaelqkvrkaeeerlrqeakerekerilqeheqik
kktvrerleqikktelgakafkdidiedleeldpdfimakqveqlekekkelqerlknqe
kkidyferakrleeipliksayeeqrikdmdlweqqeeerittmqlerekalehknrmsr
mledrdlfvmrlkaarqsvyeeklkqfeerlaeerhnrleerkrqrkeerrityyrekee
eeqrraeeqmlkereereraerakreeelreyqervkkleeverkkrqreleieererrr
eeerrlgdsslsrkdsrwgdrdsegtwrkgpeadsewrrgppekewrrgegrdedrshrr
deerprrlgddedrepslrpdddrvprrgmdddrgprrgpeedrfsrrgadddrpswrnt
dddrpprriadedrgnwrhadddrpprrgldedrgswrtadedrgprrgmdddrgprrgg
addersswrnadddrgprrgldddrgprrgmdddrgprrgmdddrgprrgmdddrgprrg
ldddrgpwrnadddriprrgaeddrgpwrnmdddrlsrradddrfprrgddsrpgpwrpl
vkpggwrekekareeswgppresrpseerewdrekerdrdnqdreendkdpererdrerd
vdredrfrrprdeggwrrgpaeessswrdssrrddrdrddrrrerddrrdlrerrdlrdd
rdrrgpplrsereevsswrraddrkddrveerdpprrvpppalsrdrerdrdreregeke
kaswraekdreslrrtknetdedgwttvrr

    Sequence, based on observed residues (ATOM records):
    >6ybtu (u:)
qtieerkerleslniqrekeeleqreaelqkvrkaeeerlrqeakerekerilqeheqik
kktvrerleqikktelgakafkdidiedleeldpdfimakqveqlekekkelqerlknqe
kkidyferakrlee