PDB entry 6y8l
View 6y8l on RCSB PDB site
Description: Mycobacterium thermoresistibile GyrB21 in complex with novobiocin
Class: DNA binding protein
Keywords: Binding Sites, DNA Gyrase, inhibitors, novobiocin, topoisomerase IV, ISOMERASE, DNA BINDING PROTEIN
Deposited on
2020-03-05, released
2020-08-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-09-30, with a file datestamp of
2020-09-25.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.62
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA gyrase subunit b
Species: Mycolicibacterium thermoresistibile [TaxId:1797]
Gene: gyrB, RMCT_1109
Database cross-references and differences (RAF-indexed):
- Uniprot A0A117ILT2 (2-185)
- engineered mutation (175-176)
Domains in SCOPe 2.08: d6y8la_ - Chain 'B':
Compound: DNA gyrase subunit b
Species: Mycolicibacterium thermoresistibile [TaxId:1797]
Gene: gyrB, RMCT_1109
Database cross-references and differences (RAF-indexed):
- Uniprot A0A117ILT2 (Start-185)
- engineered mutation (175-176)
Domains in SCOPe 2.08: d6y8lb_ - Heterogens: NOV, ZN, EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6y8lA (A:)
gmlegleavrkrpgmyigstgerglhhliwevvdnavdeamaghatkvrvrlladggvev
sddgrgipvemhesgvptvdvvmtqvgvsvvnalstrmeveicrdgyqwfqtydksvpgt
lkqgektrktgtvvrfwpdpdvfetttfdfetvarrlqeqaflnkgltieliderdgkhr
tfyypg
Sequence, based on observed residues (ATOM records): (download)
>6y8lA (A:)
legleavrkrpgmyigstgerglhhliwevvdnavdeamaghatkvrvrlladggvevsd
dgrgipvemhesgvptvdvvmtqvgvsvvnalstrmeveicrdgyqwfqtydksvpgtlk
qgektrktgtvvrfwpdpdvfetttfdfetvarrlqeqaflnkgltieliderdgkhrtf
yypg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6y8lB (B:)
gmlegleavrkrpgmyigstgerglhhliwevvdnavdeamaghatkvrvrlladggvev
sddgrgipvemhesgvptvdvvmtqvgvsvvnalstrmeveicrdgyqwfqtydksvpgt
lkqgektrktgtvvrfwpdpdvfetttfdfetvarrlqeqaflnkgltieliderdgkhr
tfyypg
Sequence, based on observed residues (ATOM records): (download)
>6y8lB (B:)
gleavrkrpgmyigstgerglhhliwevvdnavdeamaghatkvrvrlladggvevsddg
rgipvemgvptvdvvmtqvgvsvvnalstrmeveicrdgyqwfqtydksvpgtlkqgekt
rktgtvvrfwpdpdvfetttfdfetvarrlqeqaflnkgltieliderdgkhrtfyypg