PDB entry 6y88

View 6y88 on RCSB PDB site
Description: igps (indole-3-glycerol phosphate synthase) from pseudomonas aeruginosa in complex with substrate inhibitor rcdrp
Deposited on 2020-03-03, released 2020-09-23
The last revision was dated 2020-12-02, with a file datestamp of 2020-11-27.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: indole-3-glycerol phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: trpC, DT376_13060
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: indole-3-glycerol phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: trpC, DT376_13060
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: indole-3-glycerol phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: trpC, DT376_13060
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: indole-3-glycerol phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: trpC, DT376_13060
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: indole-3-glycerol phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: trpC, DT376_13060
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: indole-3-glycerol phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: trpC, DT376_13060
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Indole-3-glycerol phosphate synthase,Indole-3-glycerol phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: trpC, DT376_13060
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: indole-3-glycerol phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: trpC, DT376_13060
    Database cross-references and differences (RAF-indexed):
  • Heterogens: 137, GOL, CIT, PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6y88A (A:)
msvptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepavia
eikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpv
irkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgtele
ralktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevse
vyaflvgeafmraddpglelkrlffqergavvlgadpdtsghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y88A (A:)
vptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepaviaei
kkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpvir
kdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgtelera
lktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsevy
aflvgeafmraddpglelkrlffq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6y88B (B:)
msvptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepavia
eikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpv
irkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgtele
ralktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevse
vyaflvgeafmraddpglelkrlffqergavvlgadpdtsghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y88B (B:)
svptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepaviae
ikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpvi
rkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgteler
alktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsev
yaflvgeafmraddpglelkrlffq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6y88C (C:)
msvptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepavia
eikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpv
irkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgtele
ralktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevse
vyaflvgeafmraddpglelkrlffqergavvlgadpdtsghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y88C (C:)
svptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepaviae
ikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpvi
rkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgteler
alktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsev
yaflvgeafmraddpglelkrlff

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6y88D (D:)
msvptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepavia
eikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpv
irkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgtele
ralktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevse
vyaflvgeafmraddpglelkrlffqergavvlgadpdtsghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y88D (D:)
ptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepaviaeik
kaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpvirk
dfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgteleral
ktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsevya
flvgeafmraddpglelkrlffqer

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6y88E (E:)
msvptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepavia
eikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpv
irkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgtele
ralktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevse
vyaflvgeafmraddpglelkrlffqergavvlgadpdtsghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y88E (E:)
svptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepaviae
ikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpvi
rkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgteler
alktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsev
yaflvgeafmraddpglelkrlffq

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6y88F (F:)
msvptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepavia
eikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpv
irkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgtele
ralktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevse
vyaflvgeafmraddpglelkrlffqergavvlgadpdtsghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y88F (F:)
svptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepaviae
ikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpvi
rkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgteler
alktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsev
yaflvgeafmraddpglelkrlffq

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6y88G (G:)
xxxxxxxxxxxxxxvnlaeverlarsadaprgfanallerakrkepaviaeikkaspskg
vlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpvirkdfmidpy
qivearaigadcillivsalddvlmaelaataksvgldvlvevhdgteleralktldtpl
vginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsevyaflvgeaf
mraddpglelkrlffqergavvlgadpdtsghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y88G (G:)
xxxxxxxxxxxxxxvnlaeverlarsadaprgfanallerakrkepaviaeikkaspskg
vlrehfvpaeiarsyeaggaaclsvltdqgadaylkearaacalpvirkdfmidpyqive
araigadcillivsalddvlmaelaataksvgldvlvevhdgteleralktldtplvgin
nrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsevyaflvgeafmrad
dpglelkrlffqe

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6y88H (H:)
msvptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepavia
eikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpv
irkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgtele
ralktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevse
vyaflvgeafmraddpglelkrlffqergavvlgadpdtsghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y88H (H:)
svptvlqkilarkaeevaerrarvnlaeverlarsadaprgfanallerakrkepaviae
ikkaspskgvlrehfvpaeiarsyeaggaaclsvltdvdffqgadaylkearaacalpvi
rkdfmidpyqivearaigadcillivsalddvlmaelaataksvgldvlvevhdgteler
alktldtplvginnrnlhtfevslettldllpeiprdrlvvtesgilnradvelmevsev
yaflvgeafmraddpglelkrlff