PDB entry 6y5w

View 6y5w on RCSB PDB site
Description: crystal structure of the envelope glycoprotein complex of andes virus in a near postfusion conformation
Deposited on 2020-02-26, released 2020-10-14
The last revision was dated 2020-10-28, with a file datestamp of 2020-10-23.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Envelope polyprotein,Envelope polyprotein
    Species: Andes orthohantavirus [TaxId:1980456]
    Gene: M, ADT63_73450gpM, ADT63_73451gpM, ADT63_73452gpM, ADT63_74519gpM, ADT63_74520gpM
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Envelope polyprotein,Envelope polyprotein
    Species: Andes orthohantavirus [TaxId:1980456]
    Gene: M, ADT63_73450gpM, ADT63_73451gpM, ADT63_73452gpM, ADT63_74519gpM, ADT63_74520gpM
    Database cross-references and differences (RAF-indexed):
  • Heterogens: BMA, MAN, NAG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6y5wA (A:)
ktiyelkmecphtvglgqgyiigstelglisieaasdiklesscnfdlhttsmaqksftq
vewrkksdttdttnaasttfeaqtktvnlrgtcilapelydtlkkvkktvlcydltcnqt
hcqptvyliapvltcmsirscmasvftsriqviyekthcvtgqliegqcfnpahtltlsq
pahtydtvtlpiscfftpkkseqlkviktfegiltktgctenalqgyyvcflgshsepli
vpsledirsaevvsrmlvhprgedhdaiqnsqshlrivgpitakvpstsstdtlkgtafa
gvpmysslstlvrnadpefvfspgivpesnhstcdkktvpitwtgylpisgemeggsglv
prgsgggsgggswshpqfekgggtgggtlvprgsgtggetplmesgwsdtahgvgeipmk
tdleldfslpssssysyrrkltnpankeesipfhfqmekqvihaeiqplghwmdatfnik
tafhcygacqkysypwqtskcffekdyqyetgwgcnpgdcpgvgtgctacgvyldklksv
gkaykiislkytrkvciqlgteqtckhidandclvtpsvkvcivgtvsklqpsdtllflg
pleqggiilkqwcttscafgdpgdimstpsgmrcpehtgsfrkicgfattpvceyqgnti
sgykrmmatkdsfqsfnltephittnklewidpdgntrdhvnlvlnrdvsfqdlsdnpck
vdlhtqaiegawgsgvgftltctvgltecpsfmtsikacdlamcygstvtnlargsntvk
vvgkgghsgssfkcchdtdcssegllasaphlervtgfnqidsdkvyddgappctfkcwf
tksgewllgilngnpfeddddkagwshpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >6y5wA (A:)
iyelkmecphtvglgqgyiigstelglisieaasdiklesscnfdlhttsmaqksftqve
wrkksdttdttnaasttfeaqtktvnlrgtcilapelydtvkktvlcydltcnqthcqpt
vyliapvltcmsirscmasvftsriqviyekthcvtgqliegqcfnpahtltlsqpahty
dtvtlpiscfftpkkseqlkviktfegiltktgctenalqgyyvcflgshseplivpsle
dirsaevvsrmlvhprgedhdaiqnsqshlrivgpitakvpstsstdtlkgtafagvpmy
sslstlvrnadpefvfspgivpesnhstcdkktvpitwtgylpisgeme

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6y5wB (B:)
ktiyelkmecphtvglgqgyiigstelglisieaasdiklesscnfdlhttsmaqksftq
vewrkksdttdttnaasttfeaqtktvnlrgtcilapelydtlkkvkktvlcydltcnqt
hcqptvyliapvltcmsirscmasvftsriqviyekthcvtgqliegqcfnpahtltlsq
pahtydtvtlpiscfftpkkseqlkviktfegiltktgctenalqgyyvcflgshsepli
vpsledirsaevvsrmlvhprgedhdaiqnsqshlrivgpitakvpstsstdtlkgtafa
gvpmysslstlvrnadpefvfspgivpesnhstcdkktvpitwtgylpisgemeggsglv
prgsgggsgggswshpqfekgggtgggtlvprgsgtggetplmesgwsdtahgvgeipmk
tdleldfslpssssysyrrkltnpankeesipfhfqmekqvihaeiqplghwmdatfnik
tafhcygacqkysypwqtskcffekdyqyetgwgcnpgdcpgvgtgctacgvyldklksv
gkaykiislkytrkvciqlgteqtckhidandclvtpsvkvcivgtvsklqpsdtllflg
pleqggiilkqwcttscafgdpgdimstpsgmrcpehtgsfrkicgfattpvceyqgnti
sgykrmmatkdsfqsfnltephittnklewidpdgntrdhvnlvlnrdvsfqdlsdnpck
vdlhtqaiegawgsgvgftltctvgltecpsfmtsikacdlamcygstvtnlargsntvk
vvgkgghsgssfkcchdtdcssegllasaphlervtgfnqidsdkvyddgappctfkcwf
tksgewllgilngnpfeddddkagwshpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >6y5wB (B:)
gwsdtahgvgeipmktdleldfslpssssysyrrkltnsipfhfqmekqvihaeiqplgh
wmdatfniktafhcygacqkysypwqtskcffekdyqyetgwgcnpgdcpgvgtgctacg
vyldklksvgkaykiislkytrkvciqlgteqtckhidandclvtpsvkvcivgtvsklq
psdtllflgpleqggiilkqwcttscafgdpgdimstpsgmrcpehtgsfrkicgfattp
vceyqgntisgykrmmatkdsfqsfnltephittnklewidpdgntrdhvnlvlnrdvsf
qdlsdnpckvdlhtqaiegawgsgvgftltctvgltecpsfmtsikacdlamcygstvtn
largsntvkvvgkgghsgssfkcchdtdcssegllasaphlervt