PDB entry 6y5m

View 6y5m on RCSB PDB site
Description: crystal structure of mouse autotaxin in complex with compound 1a
Deposited on 2020-02-25, released 2020-11-18
The last revision was dated 2020-12-23, with a file datestamp of 2020-12-18.
Experiment type: XRAY
Resolution: 2.01 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ectonucleotide pyrophosphatase/phosphodiesterase family member 2
    Species: Mus musculus [TaxId:10090]
    Gene: Enpp2, Npps2, Pdnp2
    Database cross-references and differences (RAF-indexed):
  • Heterogens: O9W, NAG, ZN, PO4, CL, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6y5mA (A:)
    aewdegpptvlsdspwtntsgsckgrcfelqevgppdcrcdnlcksysscchdfdelclk
    targwectkdrcgevrneenachcsedclsrgdcctnyqvvckgeshwvdddceeirvpe
    cpagfvrppliifsvdgfrasymkkgskvmpnieklrscgthapymrpvyptktfpnlyt
    latglypeshgivgnsmydpvfdatfhlrgrekfnhrwwggqplwitatkqgvragtffw
    svsipherriltilqwlslpdnerpsvyafyseqpdfsghkygpfgpemtnplreidktv
    gqlmdglkqlklhrcvnvifvgdhgmedvtcdrteflsnyltnvdditlvpgtlgrirpk
    ipnnlkydpkaiianltckkpdqhfkpymkqhlpkrlhyannrriedlhllverrwhvar
    kpldvykkpsgkcffqgdhgfdnkvnsmqtvfvgygptfkyrtkvppfenielynvmcdl
    lglkpapnngthgslnhllrtntfrptlpeevsrpnypgimylqsdfdlgctcddknkle
    elnkrlhtkgsteerhllygrpavlyrtsydilyhtdfesgyseiflmplwtsytiskqa
    evssipehltncvrpdvrvspgfsqnclaykndkqmsygflfppylssspeakydaflvt
    nmvpmypafkrvwtyfqrvlvkkyaserngvnvisgpifdynynglrdiedeikqyvegs
    sipvpthyysiitscldftqpadkcdgplsvssfilphrpdndescnssedeskwveelm
    kmhtarvrdiehltgldfyrktsrsyseiltlktylhtyeseihhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6y5mA (A:)
    wtntsgsckgrcfelqevgppdcrcdnlcksysscchdfdelclktargwectkdrcger
    neenachcsedclsrgdcctnyqvvckgeshwvdddceeirvpecpagfvrppliifsvd
    gfrasymkkgskvmpnieklrscgthapymrpvyptktfpnlytlatglypeshgivgns
    mydpvfdatfhlrgrekfnhrwwggqplwitatkqgvragtffwsvsipherriltilqw
    lslpdnerpsvyafyseqpdfsghkygpfgpemtnplreidktvgqlmdglkqlklhrcv
    nvifvgdhgmedvtcdrteflsnyltnvdditlvpgtlgrirpkipnnlkydpkaiianl
    tckkpdqhfkpymkqhlpkrlhyannrriedlhllverrwhvarkpldkcffqgdhgfdn
    kvnsmqtvfvgygptfkyrtkvppfenielynvmcdllglkpapnngthgslnhllrtnt
    frptlpeevsrpnypgimylqsdfdlgctctkgsteerhllygrpavlyrtsydilyhtd
    fesgyseiflmplwtsytiskqaevssipehltncvrpdvrvspgfsqnclaykndkqms
    ygflfppylssspeakydaflvtnmvpmypafkrvwtyfqrvlvkkyaserngvnvisgp
    ifdynynglrdiedeikqyvegssipvpthyysiitscldftqpadkcdgplsvssfilp
    hrpdndescnssedeskwveelmkmhtarvrdiehltgldfyrktsrsyseiltlktylh
    tye