PDB entry 6y49

View 6y49 on RCSB PDB site
Description: Crystal structure of the paraoxon-modified A.17kappa antibody FAB fragment
Class: immune system
Keywords: QM/MM computation; designed biocatalysts; bioscavengers; phosphoryl transfer; organophosphorus agents, IMMUNE SYSTEM
Deposited on 2020-02-19, released 2020-09-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-30, with a file datestamp of 2020-09-25.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: A.17kappa antibody FAB fragment - Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y49
  • Chain 'L':
    Compound: A.17kappa antibody FAB fragment - Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y49
    Domains in SCOPe 2.08: d6y49l1, d6y49l2
  • Heterogens: DEP, HOH

PDB Chain Sequences:

  • Chain 'H':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >6y49L (L:)
    qsvltqppsvsaapgqkvtiscsgsssnignnyvswyqqlpgtapklliydnnkrpsgip
    drfsgsksgtsatlgitglqtgdeadyycgtwdsslnpvfgggtkleikrtvaapsvfif
    ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
    ltlskadyekhkvyacevthqglsspvtksfnrgecidaaaaasfleqkliseedlnsav
    dhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6y49L (L:)
    ltqppsvsaapgqkvtiscsgsssnignnyvswyqqlpgtapklliydnnkrpsgipdrf
    sgsksgtsatlgitglqtgdeadyycgtwdsslnpvfgggtkleikrtvaapsvfifpps
    deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
    skadyekhkvyacevthqglsspvtksfnrgec