PDB entry 6y42

View 6y42 on RCSB PDB site
Description: crystal structure of rsrr complexed to a 39 basepair dna fragment of the rsrr promoter
Deposited on 2020-02-19, released 2020-03-04
The last revision was dated 2020-03-25, with a file datestamp of 2020-03-20.
Experiment type: XRAY
Resolution: 4.3 Å
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Rrf2 family transcriptional regulator
    Species: Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) [TaxId:953739]
    Gene: SVEN_6563
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Rrf2 family transcriptional regulator
    Species: Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) [TaxId:953739]
    Gene: SVEN_6563
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DNA (39-mer)
    Species: Streptomyces venezuelae ATCC 10712, synthetic [TaxId:953739]
  • Chain 'F':
    Compound: DNA (39-mer)
    Species: Streptomyces venezuelae ATCC 10712, synthetic [TaxId:953739]
  • Heterogens: FES

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6y42A (A:)
mklsggvewalhccvvltaasrpvpaarlaelhdvspsylakqmqalsraglvrsvqgkt
ggyvltrpaveitlldvvqavdgpdpafvcteirqrgplatppekctkacpiaramgaae
aawraslaattiadlvatvddesgpdalpgvgawlieglghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y42A (A:)
klsggvewalhccvvltaasrpvpaarlaelhdvspsylakqmqalsraglvrsvqgktg
gyvltrpaveitlldvvqavdgpdpafvcteirqrgplatppekctkacpiaramgaaea
awraslaattiadlvatvddesgpdalpgvgawlieglg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6y42B (B:)
mklsggvewalhccvvltaasrpvpaarlaelhdvspsylakqmqalsraglvrsvqgkt
ggyvltrpaveitlldvvqavdgpdpafvcteirqrgplatppekctkacpiaramgaae
aawraslaattiadlvatvddesgpdalpgvgawlieglghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6y42B (B:)
klsggvewalhccvvltaasrpvpaarlaelhdvspsylakqmqalsraglvrsvqgktg
gyvltrpaveitlldvvqavdgpdpafvcteirqrgplatppekctkacpiaramgaaea
awraslaattiadlvatvddesgpdalpgvgawlieglg

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.