PDB entry 6y3y

View 6y3y on RCSB PDB site
Description: human coronavirus hku1 haemagglutinin-esterase
Deposited on 2020-02-19, released 2020-04-08
The last revision was dated 2020-09-30, with a file datestamp of 2020-09-25.
Experiment type: EM
Resolution: 3.39 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin-esterase
    Species: Human coronavirus HKU1 [TaxId:290028]
    Gene: HE, 2
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Hemagglutinin-esterase
    Species: Human coronavirus HKU1 [TaxId:290028]
    Gene: HE, 2
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6y3yA (A:)
lafneplnvvshlnhdwflfgdsrsdcnhinnlkiknfdyldihpslcnngkisssagds
ifksfhftrfynytgegdqiifyegvnfnpyhrfkcfpngsndvwllnkvrfyralysnm
affryltfvdipynvslskfnscksdilslnnpifinyskevyftllgcslylvplclfk
snfsqyyynidtgsvygfsnvvypdldciyislkpgsykvsttapflslptkalcfdksk
qfvpvqvvdsrwnnerasdislsvacqlpycyfrnssanyvgkydinhgdsgfisilsgl
lynvscisyygvflydnftsiwpyysfgrcptssiikhpicvydsdplvpr

    Sequence, based on observed residues (ATOM records):
    >6y3yA (A:)
neplnvvshlnhdwflfgdsrsdcnhinnlkiknfdyldihpslcnngkisssagdsifk
sfhftrfynytgegdqiifyegvnfnpyhrfkcfpngsndvwllnkvrfyralysnmaff
ryltfvdipynvslskfnscksdilslnnpifinyskevyftllgcslylvplclfksnf
sqyyynidtgsvygfsnvvypdldciyislkpgsykvsttapflslptkalcfdkskqfv
pvqvvdsrwnnerasdislsvacqlpycyfrnssanyvgkydinhgdsgfisilsgllyn
vscisyygvflydnftsiwpyysfgrcptssi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6y3yB (B:)
lafneplnvvshlnhdwflfgdsrsdcnhinnlkiknfdyldihpslcnngkisssagds
ifksfhftrfynytgegdqiifyegvnfnpyhrfkcfpngsndvwllnkvrfyralysnm
affryltfvdipynvslskfnscksdilslnnpifinyskevyftllgcslylvplclfk
snfsqyyynidtgsvygfsnvvypdldciyislkpgsykvsttapflslptkalcfdksk
qfvpvqvvdsrwnnerasdislsvacqlpycyfrnssanyvgkydinhgdsgfisilsgl
lynvscisyygvflydnftsiwpyysfgrcptssiikhpicvydsdplvpr

    Sequence, based on observed residues (ATOM records):
    >6y3yB (B:)
neplnvvshlnhdwflfgdsrsdcnhinnlkiknfdyldihpslcnngkisssagdsifk
sfhftrfynytgegdqiifyegvnfnpyhrfkcfpngsndvwllnkvrfyralysnmaff
ryltfvdipynvslskfnscksdilslnnpifinyskevyftllgcslylvplclfksnf
sqyyynidtgsvygfsnvvypdldciyislkpgsykvsttapflslptkalcfdkskqfv
pvqvvdsrwnnerasdislsvacqlpycyfrnssanyvgkydinhgdsgfisilsgllyn
vscisyygvflydnftsiwpyysfgrcptssi