PDB entry 6y1r

View 6y1r on RCSB PDB site
Description: Nb22-LBT
Class: immune system
Keywords: Nanobody, IMMUNE SYSTEM
Deposited on 2020-02-13, released 2021-02-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-24, with a file datestamp of 2021-02-19.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nb22-LBT
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y1R (0-End)
    Domains in SCOPe 2.08: d6y1ra1, d6y1ra2, d6y1ra3
  • Chain 'B':
    Compound: Nb22-LBT
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y1R
    Domains in SCOPe 2.08: d6y1rb1, d6y1rb2, d6y1rb3
  • Chain 'C':
    Compound: Nb22-LBT
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y1R (0-End)
    Domains in SCOPe 2.08: d6y1rc1, d6y1rc2, d6y1rc3
  • Chain 'D':
    Compound: Nb22-LBT
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y1R
    Domains in SCOPe 2.08: d6y1rd1, d6y1rd2, d6y1rd3
  • Chain 'E':
    Compound: Nb22-LBT
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y1R (0-End)
    Domains in SCOPe 2.08: d6y1re1, d6y1re2, d6y1re3
  • Heterogens: TB, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6y1rA (A:)
qvqlqesggglvqaggslrlscaasggtfksggmawfrqagyidtnndgwiegdelykar
efaagiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarrfrag
vvtraddvdywgkgtqvtvsshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6y1rA (A:)
qvqlqesggglvqaggslrlscaasggtfksggmawfrqagyidtnndgwiegdelykar
efaagiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarrfrag
vvtraddvdywgkgtqvtvss

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6y1rB (B:)
qvqlqesggglvqaggslrlscaasggtfksggmawfrqagyidtnndgwiegdelykar
efaagiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarrfrag
vvtraddvdywgkgtqvtvsshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6y1rB (B:)
vqlqesggglvqaggslrlscaasggmawfrqagyidtnndgwiegdelykarefaagis
wsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarvvtraddvdywg
kgtqvtvss

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6y1rC (C:)
qvqlqesggglvqaggslrlscaasggtfksggmawfrqagyidtnndgwiegdelykar
efaagiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarrfrag
vvtraddvdywgkgtqvtvsshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6y1rC (C:)
qvqlqesggglvqaggslrlscaasggtfksggmawfrqagyidtnndgwiegdelykar
efaagiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarrfrag
vvtraddvdywgkgtqvtvss

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6y1rD (D:)
qvqlqesggglvqaggslrlscaasggtfksggmawfrqagyidtnndgwiegdelykar
efaagiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarrfrag
vvtraddvdywgkgtqvtvsshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6y1rD (D:)
vqlqesggglvqaggslrlscaasggksggmawfrqagyidtnndgwiegdelykarefa
agiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarrfragvvt
raddvdywgkgtqvtvssh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6y1rE (E:)
qvqlqesggglvqaggslrlscaasggtfksggmawfrqagyidtnndgwiegdelykar
efaagiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaarrfrag
vvtraddvdywgkgtqvtvsshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6y1rE (E:)
qvqlqesggglvqaggslrlscaasggtsggmawfrqagyidtnndgwiegdelykaref
aagiswsggstdyedsvkgrftisrdnakntmylqmnslkpedtavyycaaagvvtradd
vdywgkgtqvtvssh