PDB entry 6y1n

View 6y1n on RCSB PDB site
Description: Crystal structure of the phosphonate-modified A.5 antibody FAB fragment
Class: immune system
Keywords: QM/MM computation; designed biocatalysts; bioscavengers; phosphoryl transfer; organophosphorus agents; stereospecificity, IMMUNE SYSTEM
Deposited on 2020-02-12, released 2020-09-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-30, with a file datestamp of 2020-09-25.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: FAB A.5 Heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y1N
  • Chain 'L':
    Compound: FAB A.5 Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6Y1N
    Domains in SCOPe 2.08: d6y1nl1, d6y1nl2
  • Heterogens: XOP, HOH

PDB Chain Sequences:

  • Chain 'H':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6y1nL (L:)
qsvltqppsasgtpgqrvtiscsgsssnigsnyvdwyqqlpgtapklliyrnnqrpsgvp
drfsgsksgtsaslaisglrsedeadyycaawddslgtvfgggtkleikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgecidaaaaasfleqkliseedlnsav
dhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6y1nL (L:)
svltqppsasgtpgqrvtiscsgsssnigsnyvdwyqqlpgtapklliyrnnqrpsgvpd
rfsgsksgtsaslaisglrsedeadyycaawddslgtvfgggtkleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec