PDB entry 6xuk

View 6xuk on RCSB PDB site
Description: AbLIFT design 15 of Ab 1116NS19.9
Class: antitumor protein
Keywords: pancreatic cancer, diagnosis, in-silico optimized antibody, CA19-9 binder, immunotherapeutic reagent, ANTITUMOR PROTEIN
Deposited on 2020-01-20, released 2021-02-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-03, with a file datestamp of 2021-01-29.
Experiment type: XRAY
Resolution: 1.42 Å
R-factor: N/A
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6XUK (0-End)
    Domains in SCOPe 2.08: d6xukh_
  • Chain 'L':
    Compound: light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6XUK (0-213)
    Domains in SCOPe 2.08: d6xukl_
  • Heterogens: FUC, NAG, GAL, SIA, GOL, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6xukH (H:)
evkleesggglvqpggsmklscaasgftfsdawmdwvrqspekglewvaeignkgnnhat
yyaesvkgrftvsrddsksrvylqmnslrvedtgtyycavrfafwgqgtlvtvsaastkg
psvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkth

    Sequence, based on observed residues (ATOM records): (download) 
    >6xukH (H:)
evkleesggglvqpggsmklscaasgftfsdawmdwvrqspekglewvaeignkgnnhat
yyaesvkgrftvsrddsksrvylqmnslrvedtgtyycavrfafwgqgtlvtvsaastkg
psvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6xukL (L:)
dikmtqspssmyaslgervtitckasqdinsylswfqqkpgkppktliyranrlvpgvps
rfsgsgsgqdysltissleyedmgiywclqydefprtwgggtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec