PDB entry 6xqq

View 6xqq on RCSB PDB site
Description: Structure of human D462-E4 TCR
Class: immune system
Keywords: MAIT, MR1, Metabolite presentation, IMMUNE SYSTEM
Deposited on 2020-07-10, released 2020-08-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-10-28, with a file datestamp of 2020-10-23.
Experiment type: XRAY
Resolution: 2.68 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TRAV12-2 alpha chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6XQQ
    Domains in SCOPe 2.08: d6xqqa1, d6xqqa2
  • Chain 'B':
    Compound: trbv29-1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6XQQ
    Domains in SCOPe 2.08: d6xqqb1, d6xqqb2
  • Chain 'C':
    Compound: TRAV12-2 alpha chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6XQQ
    Domains in SCOPe 2.08: d6xqqc1, d6xqqc2
  • Chain 'D':
    Compound: trbv29-1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6XQQ
    Domains in SCOPe 2.08: d6xqqd1, d6xqqd2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6xqqA (A:)
mqkeveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedg
rftaqlnkasqyvsllirdsqpsdsatylcavrdagnmltfgggtrlmvkpniqnpdpav
yqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnks
dfacanafnnsiipedtffpspess

    Sequence, based on observed residues (ATOM records): (download) 
    >6xqqA (A:)
veqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedgrfta
qlnkasqyvsllirdsqpsdsatylcavrdagnmltfgggtrlmvkpniqnpdpavyqlr
dskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfac
anafnnsiipedtffps

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6xqqB (B:)
msavisqkpsrdicqrgtsltiqcqvdsqvtmmfwyrqqpgqsltliatanqgseatyes
gfvidkfpisrpnltfstltvsnmspedssiylcsvggdslignqpqhfgdgtrlsiled
lknvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqp
lkeqpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivs
aeawgrad

    Sequence, based on observed residues (ATOM records): (download) 
    >6xqqB (B:)
savisqkpsrdicqrgtsltiqcqvdsqvtmmfwyrqqpgqsltliatanqgseatyesg
fvidkfpisrpnltfstltvsnmspedssiylcsvggdslignqpqhfgdgtrlsiledl
knvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqpl
keqpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsa
eawgra

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6xqqC (C:)
mqkeveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedg
rftaqlnkasqyvsllirdsqpsdsatylcavrdagnmltfgggtrlmvkpniqnpdpav
yqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnks
dfacanafnnsiipedtffpspess

    Sequence, based on observed residues (ATOM records): (download) 
    >6xqqC (C:)
veqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedgrfta
qlnkasqyvsllirdsqpsdsatylcavrdagnmltfgggtrlmvkpniqnpdpavyqlr
dskksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnkacanafnn
siipedtffp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6xqqD (D:)
msavisqkpsrdicqrgtsltiqcqvdsqvtmmfwyrqqpgqsltliatanqgseatyes
gfvidkfpisrpnltfstltvsnmspedssiylcsvggdslignqpqhfgdgtrlsiled
lknvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqp
lkeqpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivs
aeawgrad

    Sequence, based on observed residues (ATOM records): (download) 
    >6xqqD (D:)
savisqkpsrdicqrgtsltiqcqvdsqvtmmfwyrqqpgqsltliatanqgseatyesg
fvidkfpisrpnltfstltvsnmspedssiylcsvggdslignqpqhfgdgtrlsiledl
knvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqpl
keqpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsa
eawgra