PDB entry 6xpq

View 6xpq on RCSB PDB site
Description: human antibody d1 h1-17/h3-14 in complex with the influenza hemagglutinin head domain of a/texas/50/2012(h3n2)
Deposited on 2020-07-08, released 2021-05-19
The last revision was dated 2021-07-28, with a file datestamp of 2021-07-23.
Experiment type: XRAY
Resolution: 4.2 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/Texas/50/2012(H3N2)) [TaxId:1321009]
    Gene: HA, L998_47834gpHA
    Database cross-references and differences (RAF-indexed):
    • Uniprot R4L1D1 (0-282)
      • expression tag (283-290)
  • Chain 'B':
    Compound: antibody D1 H1-17/H3-14 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6XPQ (0-249)
  • Chain 'C':
    Compound: antibody D1 H1-17/H3-14 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6XPQ (0-211)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6xpqA (A:)
tnatelvqnssigeicdsphqildgenctlidallgdpqcdgfqnkkwdlfverskaysn
cypydvpdyaslrslvassgtlefnnesfnwngvtqngtssacirrsnnsffsrlnwlth
lnfkypalnvtmpnneqfdklyiwgvhhpvtdkdqiflyaqpsgritvstkrsqqavipn
igfrprirnipsrisiywtivkpgdillinstgnliaprgyfkirsgkssimrsdapigk
cksecitpngsipndkpfqnvnritygacpryvkqstlklatggalevlfq

    Sequence, based on observed residues (ATOM records):
    >6xpqA (A:)
atelvqnssigeicdsphqildgenctlidallgdpqcdgfqnkkwdlfverskaysncy
pydvpdyaslrslvassgtlefnnesfnwngvtqngtssacirrsnnsffsrlnwlthln
fkypalnvtmpnneqfdklyiwgvhhpvtdkdqiflyaqpsgritvstkrsqqavipnig
frprirnipsrisiywtivkpgdillinstgnliaprgyfkirsgkssimrsdapigkck
secitpngsipndkpfqnvnritygacpryvkqs

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6xpqB (B:)
qvqlqesgpglvkpseslsltcsvsggsvssnlhywswirqlpgkglewigyisytgstk
ynpslngrvtlsidasknqfslelssvtaadtavyycardffekliaddlnafdiwgqgt
mvtvsgastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfp
avlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkgsslevlfq
gplghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6xpqB (B:)
qvqlqesgpglvkpseslsltcsvsggsvssnlhywswirqlpgkglewigyisytgstk
ynpslngrvtlsidasknqfslelssvtaadtavyycardffekliaddlnafdiwgqgt
mvtvsgastkgpsvfplapssksgtaalgclvkdpepvtvswnsgaltsgvhtfpavlqs
sglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6xpqC (C:)
dirvtqspsslsasvgdrvtitcrasqsisrslnwyqqrpgkapkfliyaasnlqsgvps
rfsgggsgtdftltisslqpedfatyycqetysrtfgqgtkadikrtvaapsvfifppsd
eqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltls
kadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >6xpqC (C:)
dirvtqspsslsasvgdrvtitcrasqsisrslnwyqqrpgkapkfliyaasnlqsgvps
rfsgggsgtdftltisslqpedfatyycqetysrtfgqgtkadikrtvaapsvfifppsd
eqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltls
kadyekhkvyacevthqglsspvtksfnr