PDB entry 6xoi

View 6xoi on RCSB PDB site
Description: structure of sumo1-ml00752641 adduct bound to sae
Deposited on 2020-07-07, released 2021-03-24
The last revision was dated 2021-03-24, with a file datestamp of 2021-03-19.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SUMO-activating enzyme subunit 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SAE1, AOS1, SUA1, UBLE1A
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: SUMO-activating enzyme subunit 2
    Species: Homo sapiens [TaxId:9606]
    Gene: UBA2, SAE2, UBLE1B, HRIHFB2115
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Small ubiquitin-related modifier 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SUMO1, SMT3C, SMT3H3, UBL1, OK/SW-cl.43
    Database cross-references and differences (RAF-indexed):
  • Heterogens: VBA, SO4, ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6xoiA (A:)
mvekeeagggiseeeaaqydrqirlwgleaqkrlrasrvllvglkglgaeiaknlilagv
kgltmldheqvtpedpgaqflirtgsvgrnraeasleraqnlnpmvdvkvdtediekkpe
sfftqfdavcltccsrdvivkvdqichknsikfftgdvfgyhgytfanlgehefveektk
vakvsqgvedgpdtkrakldssettmvkkkvvfcpvkealevdwssekakaalkrttsdy
fllqvllkfrtdkgrdpssdtyeedselllqirndvldslgispdllpedfvrycfsema
pvcavvggilaqeivkalsqrdpphnnffffdgmkgngiveclgpk

    Sequence, based on observed residues (ATOM records):
    >6xoiA (A:)
ggiseeeaaqydrqirlwgleaqkrlrasrvllvglkglgaeiaknlilagvkgltmldh
eqvtpedpgaqflirtgsvgrnraeasleraqnlnpmvdvkvdtediekkpesfftqfda
vcltccsrdvivkvdqichknsikfftgdvfgyhgytfanlgehefveektmvkkkvvfc
pvkealevdwssekakaalkrttsdyfllqvllkfrtdkgrdpssdtyeedselllqirn
dvldslgispdllpedfvrycfsemapvcavvggilaqeivkalsqrdpphnnffffdgm
kgngiveclgp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6xoiB (B:)
malsrglprelaeavaggrvlvvgaggigcellknlvltgfshidlidldtidvsnlnrq
flfqkkhvgrskaqvakesvlqfypkanivayhdsimnpdynveffrqfilvmnaldnra
arnhvnrmclaadvpliesgtagylgqvttikkgvtecyechpkptqrtfpgctirntps
epihcivwakylfnqlfgeedadqevspdradpeaawepteaeararasnedgdikrist
kewakstgydpvklftklfkddirylltmdklwrkrkppvpldwaevqsqgeetnasdqq
nepqlglkdqqvldvksyarlfsksietlrvhlaekgdgaeliwdkddpsamdfvtsaan
lrmhifsmnmksrfdiksmagniipaiattnaviaglivleglkilsgkidqcrtiflnk
qpnprkkllvpcaldppnpncyvcaskpevtvrlnvhkvtvltlqdkivkekfamvapdv
qiedgkgtilisseegeteannhkklsefgirngsrlqaddflqdytllinilhsedlgk
dvefevvgdapekvgpkqaedaaksitngsddgaqpststaqeqddvlivdsdeedssnn
advseeersrkrkldekenlsakrsrieqkeelddviald

    Sequence, based on observed residues (ATOM records):
    >6xoiB (B:)
prelaeavaggrvlvvgaggigcellknlvltgfshidlidldtidvsnlnrqflfqkkh
vgrskaqvakesvlqfypkanivayhdsimnpdynveffrqfilvmnaldnraarnhvnr
mclaadvpliesgtagylgqvttikkgvtecyechfpgctirntpsepihcivwakylfn
qlfgdpvklftklfkddirylltmdklwrkrkppvpldwaevqsqlglkdqqvldvksya
rlfsksietlrveliwdkddpsamdfvtsaanlrmhifsmnmksrfdiksmagniipaia
ttnaviaglivleglkilsgkidqcrtiflnkqpnprkkllvpcaldppnpncyvcaskp
evtvrltlqdkivkekfamvapaddflqdytllinilvefevv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6xoiC (C:)
msdqeakpstedlgdkkegeyiklkvigqdsseihfkvkmtthlkklkesycqrqgvpmn
slrflfegqriadnhtpkelgmeeedvievyqeqtgghstv

    Sequence, based on observed residues (ATOM records):
    >6xoiC (C:)
yiklkvigqdsseihfkvslrflfegqriavievyqeqtgg