PDB entry 6xmd

View 6xmd on RCSB PDB site
Description: sm protein vps45 in complex with qa snare tlg2 (1-310)
Deposited on 2020-06-30, released 2020-08-19
The last revision was dated 2020-09-02, with a file datestamp of 2020-08-28.
Experiment type: XRAY
Resolution: 3.9 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vps45
    Species: CHAETOMIUM THERMOPHILUM [TaxId:209285]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Tlg2 Qa SNARE
    Species: CHAETOMIUM THERMOPHILUM [TaxId:209285]
    Database cross-references and differences (RAF-indexed):
    • Uniprot G0SGW7 (2-End)
      • expression tag (0-1)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6xmdA (A:)
    mdivqaavgyvnrmvtagggasgsgapsakmkillldrdtlpfistavsqstllnhevyl
    mdridnqnrekmrhlrclcflrptldsvgllvdelrepkygeyhlffsnvvkkstlerla
    eaddhevvkvvqelfldysvinpdlfslnmslpthrlwsgspdmwnadslqrategiiav
    llslkkrpliryqktsglarrlahevrtfvskeeqlfdfrrvdtppillildrredpvtp
    llmqwtyqamvhhllginngrvdmssvpdirpelkeivlsqdqdpffkknmylnfgdlgs
    nikdyveqyqsrtksthdiesiadmkrfmeeypefrklsgnvskhvtlvselsrrvgaen
    llevseleqsiacndnhssdlktlqshlsnpsippqnklilvalyalryakhpsnslpil
    ldlltaaagvparqvalipklltyhrslhaaqpgadssgveslfettpgtvvanlfgvgs
    sggrfkglkgvenvytqhspkmegtlhqlvkgrlresqfpfvdttsagpgassgstsglg
    svtkdkpqdiivfmiggatyeeaklvaginasvpgvrvvlggtsvvnakeflaevedavd
    gwggldlsggigsggsgpgsarrrgaaalvprgsrsvdhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6xmdA (A:)
    mdivqaavgyvnrmvtagggakmkillldrdtlpfistavsqstllnhevylmdridnqn
    rekmrhlrclcflrptldsvgllvdelrepkygeyhlffsnvvkkstlerlaeaddhevv
    kvvqelfldysvinpdlfslnmslpthrlwsgspdmwnadslqrategiiavllslkkrp
    liryqktsglarrlahevrtfvskeeqlfdfrrvdtppillildrredpvtpllmqwtyq
    amvhhllginngrvdmssvpdirpelkeivlsqdqdpffkknmylnfgdlgsnikdyveq
    yqsrtksthdiesiadmkrfmeeypefrklsgnvskhvtlvselsrrvgaenllevsele
    qsiacndnhssdlktlqshlsnpsippqnklilvalyalryakhpsnslpilldlltaaa
    gvparqvalipklltyhrslhaaqlfeggrfkglkgvenvytqhspkmegtlhqlvkgrl
    resqfpfvdttdkpqdiivfmiggatyeeaklvaginasvpgvrvvlggtsvvnakefla
    evedavdgwggldlsg
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6xmdB (B:)
    gsmwrdrtnlyisyrqsyahhprhrnrygrtptpvnerfggsagassgvlfsadddrrgl
    lsagaydtvddgdaviemdvlpprwvdisdevteklaeiatksqkldrlhqkhvlpgfnd
    ddtkkaeeaeierltqeitrgfhdcrgcilrieqmvreakasgqltradevmaknvrvnl
    atrvqeasaafrkkqsaylksidmagvasdieraaspfpgssysnnpsllesdadrtyse
    saiqapthqkllqsndaiilqrereieeiaqgiielsdlfrelqtmvidqgtlldridyn
    vermatdvkeaa
    

    Sequence, based on observed residues (ATOM records):
    >6xmdB (B:)
    gsmwrdrtnlyisyrqlpprwvdisdevteklaeiatksqkldrlhkkaeeaeierltqe
    itrgfhdcrgcilrieqmvreakasgqltradevmaknvrvnlatrvqeasaafrkkqsa
    ylksisndaiilqrereieeiaqgiielsdlfrelqtmvidqgtlldridynvermat