PDB entry 6xdj

View 6xdj on RCSB PDB site
Description: Crystal Structure Analysis of MBP-SIN3
Class: transcription
Keywords: RPD3 histone deacetylase complexes, epigenetic repression, TRANSCRIPTION
Deposited on 2020-06-10, released 2021-06-16
The last revision prior to the SCOPe 2.07 freeze date was dated 2021-06-16, with a file datestamp of 2021-06-11.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Maltodextrin-binding protein,Transcriptional regulatory protein SIN3
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SIN3
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A4P1LXE0 (1-358)
      • conflict (82-83)
      • conflict (172-173)
      • conflict (239)
      • linker (359-370)
    • Uniprot P22579 (371-End)
  • Chain 'B':
    Compound: Maltodextrin-binding protein,Transcriptional regulatory protein SIN3
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SIN3
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A4P1LXE0 (1-358)
      • initiating methionine (0)
      • conflict (82-83)
      • conflict (172-173)
      • conflict (239)
      • linker (359-370)
    • Uniprot P22579 (371-442)
  • Chain 'C':
    Compound: Maltodextrin-binding protein,Transcriptional regulatory protein SIN3
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SIN3
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A4P1LXE0 (Start-358)
      • conflict (82-83)
      • conflict (172-173)
      • conflict (239)
      • linker (359-370)
    • Uniprot P22579 (371-End)
  • Chain 'D':
    Compound: Maltodextrin-binding protein,Transcriptional regulatory protein SIN3
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: SIN3
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A4P1LXE0 (1-358)
      • initiating methionine (0)
      • conflict (82-83)
      • conflict (172-173)
      • conflict (239)
      • linker (359-370)
    • Uniprot P22579 (371-End)
    Domains in SCOPe 2.07: d6xdjd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6xdjD (D:)
mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdi
ifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynk
dllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydik
dvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsa
vnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkpl
gavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvda
alaaaqtnaaaknvdvefsqaisyvnkiktrfadqpdiykhfleilqtyqreqkpinevy
aqvthlfqnapdlledfkkflpd

    Sequence, based on observed residues (ATOM records): (download) 
    >6xdjD (D:)
mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdi
ifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynk
dllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaakydikd
vgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsav
nygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplg
avalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaa
laaaqtnaaak