PDB entry 6x9x

View 6x9x on RCSB PDB site
Description: Crystal structure of Fab fragment of Anti-HCV E2 antibody (HC84.26)
Class: antiviral protein, immune system
Keywords: anti HCV E2, Immune system, Fab fragment, ANTIVIRAL PROTEIN
Deposited on 2020-06-03, released 2020-12-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-12-23, with a file datestamp of 2020-12-18.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HC84.26 Fab Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X9X
    Domains in SCOPe 2.08: d6x9xa_
  • Chain 'B':
    Compound: HC84.26 Fab Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X9X (0-212)
    Domains in SCOPe 2.08: d6x9xb1, d6x9xb2
  • Heterogens: ACT, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6x9xA (A:)
qvqpvqsgaevkkpgssvkvsceasggthsnyvitwvrqapgqglewmggfipdfrtamy
aqgfqgrvtitadestslaymeltnlrsedtavyycargplsrgyydywgpgtlvtvsas
tkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdktagwshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >6x9xA (A:)
sgaevkkpgssvkvsceasnyvitwvrqapgqglewmggfipdfrtamyaqgfqgrvtit
adestslaymeltnlrsedtavyycargplsrgyydywgpgtlvtvsastkgpsvfplap
sskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvtvps
sslgtqtyicnvnhkpsntkvdkrvepksc

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6x9xB (B:)
syvltqppsvsvapgqtasitcsgdklgdkyvswyqqrpgqspvlvlyqdskrpsgiper
fsgsnsgntatltisgtqamdeadyycqawdssalvfgggtkltvlrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrgec