PDB entry 6x9s
View 6x9s on RCSB PDB site
Description: HIV-1 Envelope Glycoprotein BG505 SOSIP.664 expressed in stable CHO cells in complex with RM20A3 Fab
Class: viral protein/immune system
Keywords: HIV-1, Envelope, glycoprotein, spike, vaccine, VIRAL PROTEIN-IMMUNE SYSTEM complex
Deposited on
2020-06-03, released
2020-11-04
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-11-25, with a file datestamp of
2020-11-20.
Experiment type: EM
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120
Species: HUMAN IMMUNODEFICIENCY VIRUS 1 [TaxId:11676]
Gene: ENV
Database cross-references and differences (RAF-indexed):
- Uniprot Q2N0S6
- engineered mutation (335)
- engineered mutation (503)
- Chain 'B':
Compound: HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp41
Species: HUMAN IMMUNODEFICIENCY VIRUS 1 [TaxId:11676]
Gene: ENV
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: RM20A3 Fab Heavy Chain
Species: Macaca mulatta [TaxId:9544]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6x9sh_ - Chain 'L':
Compound: RM20A3 Fab Light Chain
Species: Macaca mulatta [TaxId:9544]
Database cross-references and differences (RAF-indexed):
- Heterogens: NAG
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'H':
Sequence, based on SEQRES records: (download)
>6x9sH (H:)
evqlvetggglvqpggslklscrasgytfssfamswvrqapgkglewvslindrggltfy
vdsvkgrftisrdnskntlslqmhslrdgdtavyycatggmssalqsskyyfdfwgqgal
vtvss
Sequence, based on observed residues (ATOM records): (download)
>6x9sH (H:)
evqlvetggglvqpggslklscrasgytfssfamswvrqapgkglewvslindrggltfy
vdsvkgrftisrdnskntlslqmhslrdgdtavyycatggmssalqsskyyfdfwgqgal
vtvs
- Chain 'L':
No sequence available.