PDB entry 6x5s

View 6x5s on RCSB PDB site
Description: human alpha-1,6-fucosyltransferase (fut8) bound to gdp and a3'-asn
Deposited on 2020-05-26, released 2020-10-07
The last revision was dated 2020-12-23, with a file datestamp of 2020-12-18.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Alpha-(1,6)-fucosyltransferase
    Species: Homo sapiens [TaxId:9606]
    Gene: FUT8
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Alpha-(1,6)-fucosyltransferase
    Species: Homo sapiens [TaxId:9606]
    Gene: FUT8
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: A3'-Asn
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X5S (Start-1)
  • Chain 'D':
    Compound: A3'-Asn
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X5S (Start-1)
  • Heterogens: BMA, GDP, MAN, NAG, CL, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6x5sA (A:)
lgkdheilrrriengakelwfflqselkklknlegnelqrhadeflldlghhersimtdl
yylsqtdgagdwrekeakdltelvqrritylqnpkdcskakklvcninkgcgygcqlhhv
vycfmiaygtqrtlilesqnwryatggwetvfrpvsetctdrsgistghwsgevkdknvq
vvelpivdslhprppylplavpedladrlvrvhgdpavwwvsqfvkylirpqpwlekeie
eatkklgfkhpvigvhvrrtdkvgteaafhpieeymvhveehfqllarrmqvdkkrvyla
tddpsllkeaktkypnyefisdnsiswsaglhnrytenslrgvildihflsqadflvctf
ssqvcrvayeimqtlhpdasanfhslddiyyfggqnahnqiaiyahqprtadeipmepgd
iigvagnhwdgyskgvnrklgrtglypsykvrekietvkyptypea

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6x5sB (B:)
lgkdheilrrriengakelwfflqselkklknlegnelqrhadeflldlghhersimtdl
yylsqtdgagdwrekeakdltelvqrritylqnpkdcskakklvcninkgcgygcqlhhv
vycfmiaygtqrtlilesqnwryatggwetvfrpvsetctdrsgistghwsgevkdknvq
vvelpivdslhprppylplavpedladrlvrvhgdpavwwvsqfvkylirpqpwlekeie
eatkklgfkhpvigvhvrrtdkvgteaafhpieeymvhveehfqllarrmqvdkkrvyla
tddpsllkeaktkypnyefisdnsiswsaglhnrytenslrgvildihflsqadflvctf
ssqvcrvayeimqtlhpdasanfhslddiyyfggqnahnqiaiyahqprtadeipmepgd
iigvagnhwdgyskgvnrklgrtglypsykvrekietvkyptypea

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6x5sC (C:)
ank

    Sequence, based on observed residues (ATOM records):
    >6x5sC (C:)
n

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6x5sD (D:)
ank

    Sequence, based on observed residues (ATOM records):
    >6x5sD (D:)
n