PDB entry 6x1u

View 6x1u on RCSB PDB site
Description: structure of phis fab (sc39-4) in complex with phis mimetic peptide
Deposited on 2020-05-19, released 2021-02-03
The last revision was dated 2021-02-24, with a file datestamp of 2021-02-19.
Experiment type: XRAY
Resolution: 1.64 Å
R-factor: N/A
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SC39-4 Heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X1U (0-End)
  • Chain 'B':
    Compound: SC39-4 Light chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X1U (0-212)
  • Chain 'C':
    Compound: ACLYana-3-pTza peptide
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X1U
  • Chain 'D':
    Compound: ACLYana-3-pTza peptide
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X1U
  • Chain 'H':
    Compound: SC39-4 Heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X1U (0-End)
  • Chain 'L':
    Compound: SC39-4 Light chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X1U (0-212)
  • Heterogens: UKD, EDO, ACT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6x1uA (A:)
esveesggrlvtpggsltltctvsgfslsrynmgwvrqapgkglewigwipfrgslkyat
watgrftisrtsttvdlrmtgltaadtatyfcvrssdgfdlwgpgtlvtissssgqpkap
svfplapccgdtpsstvtlgclvkgylpepvtvtwnsgtltngvrtfpsvrqssglysls
svvsvtsssqpvtcnvahpatntkvdktvapstcshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6x1uA (A:)
esveesggrlvtpggsltltctvsgfslsrynmgwvrqapgkglewigwipfrgslkyat
watgrftisrtsttvdlrmtgltaadtatyfcvrssdgfdlwgpgtlvtissssgqpkap
svfplapccgdtpsstvtlgclvkgylpepvtvtwnsgtltngvrtfpsvrqssglysls
svvsvtsssqpvtcnvahpatntkvdktvapstc

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6x1uB (B:)
dmtqtpasveavvggtvtikcqasrdtgdgliwyqqkpgqppkrliykastvasgvpsrf
kgrgsgtdftltisdlecadaatyychsnfynrwtygnafgggtevvvkgdpvaptvlif
ppaadqvatgtvtivcvankyfpdvtvtwevdgttqttgiensktpqnsadctynlsstl
tltstqynshkeytckvtqgttsvvqsfnrgdc

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6x1uC (C:)
agagxagag

    Sequence, based on observed residues (ATOM records):
    >6x1uC (C:)
gxag

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6x1uD (D:)
agagxagag

    Sequence, based on observed residues (ATOM records):
    >6x1uD (D:)
gxag

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6x1uH (H:)
esveesggrlvtpggsltltctvsgfslsrynmgwvrqapgkglewigwipfrgslkyat
watgrftisrtsttvdlrmtgltaadtatyfcvrssdgfdlwgpgtlvtissssgqpkap
svfplapccgdtpsstvtlgclvkgylpepvtvtwnsgtltngvrtfpsvrqssglysls
svvsvtsssqpvtcnvahpatntkvdktvapstcshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6x1uH (H:)
esveesggrlvtpggsltltctvsgfslsrynmgwvrqapgkglewigwipfrgslkyat
watgrftisrtsttvdlrmtgltaadtatyfcvrssdgfdlwgpgtlvtissssgqpkap
svfplapccgdtpsstvtlgclvkgylpepvtvtwnsgtltngvrtfpsvrqssglysls
svvsvtsssqpvtcnvahpatntkvdktvapstc

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6x1uL (L:)
dmtqtpasveavvggtvtikcqasrdtgdgliwyqqkpgqppkrliykastvasgvpsrf
kgrgsgtdftltisdlecadaatyychsnfynrwtygnafgggtevvvkgdpvaptvlif
ppaadqvatgtvtivcvankyfpdvtvtwevdgttqttgiensktpqnsadctynlsstl
tltstqynshkeytckvtqgttsvvqsfnrgdc