PDB entry 6x1h

View 6x1h on RCSB PDB site
Description: crystal structure of a guanine nucleotide exchange factor (gef) domain from the orientia tsutsugamushi protein otdub
Deposited on 2020-05-18, released 2020-11-25
The last revision was dated 2020-12-16, with a file datestamp of 2020-12-11.
Experiment type: XRAY
Resolution: 2.91 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ULP_PROTEASE domain-containing protein
    Species: Orientia tsutsugamushi [TaxId:334380]
    Gene: OTT_1962
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: ULP_PROTEASE domain-containing protein
    Species: Orientia tsutsugamushi [TaxId:334380]
    Gene: OTT_1962
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: ULP_PROTEASE domain-containing protein
    Species: Orientia tsutsugamushi [TaxId:334380]
    Gene: OTT_1962
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3CVM3 (Start-212)
      • expression tag (213-214)
  • Chain 'D':
    Compound: ULP_PROTEASE domain-containing protein
    Species: Orientia tsutsugamushi [TaxId:334380]
    Gene: OTT_1962
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3CVM3 (Start-212)
      • expression tag (213-217)
  • Chain 'E':
    Compound: ULP_PROTEASE domain-containing protein
    Species: Orientia tsutsugamushi [TaxId:334380]
    Gene: OTT_1962
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3CVM3 (Start-212)
      • expression tag (213-216)
  • Chain 'F':
    Compound: ULP_PROTEASE domain-containing protein
    Species: Orientia tsutsugamushi [TaxId:334380]
    Gene: OTT_1962
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3CVM3 (Start-212)
      • expression tag (213-214)
  • Heterogens: NI, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6x1hA (A:)
merlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekga
vslaeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkrik
edalraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadss
digylnddslknltpenlnafeqavaadidklmhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6x1hA (A:)
rlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekgavs
laeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkriked
alraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadssdi
gylnddslknltpenlnafeqavaadidklm

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6x1hB (B:)
merlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekga
vslaeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkrik
edalraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadss
digylnddslknltpenlnafeqavaadidklmhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6x1hB (B:)
rlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekgavs
laeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkriked
alraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadssdi
gylnddslknltpenlnafeqavaadidklm

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6x1hC (C:)
merlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekga
vslaeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkrik
edalraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadss
digylnddslknltpenlnafeqavaadidklmhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6x1hC (C:)
rlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekgavs
laeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkriked
alraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadssdi
gylnddslknltpenlnafeqavaadidklmhh

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6x1hD (D:)
merlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekga
vslaeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkrik
edalraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadss
digylnddslknltpenlnafeqavaadidklmhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6x1hD (D:)
rlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekgavs
laeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkriked
alraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadssdi
gylnddslknltpenlnafeqavaadidklmhhhhh

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6x1hE (E:)
merlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekga
vslaeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkrik
edalraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadss
digylnddslknltpenlnafeqavaadidklmhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6x1hE (E:)
rlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekgavs
laeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkriked
alraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadssdi
gylnddslknltpenlnafeqavaadidklmhhhh

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6x1hF (F:)
merlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekga
vslaeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkrik
edalraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadss
digylnddslknltpenlnafeqavaadidklmhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6x1hF (F:)
rlvkkvtsnletelkffkgrlvqelmqivknengridhtsknwqesasvllnsqekgavs
laeveravskmtqklrdqkvseeevvniesklkferasleaklfddneikelinkriked
alraipflgsdsesfmekispfvklpddsysllkandkhhpfqnilysnalkffadssdi
gylnddslknltpenlnafeqavaadidklmhh