PDB entry 6wzo

View 6wzo on RCSB PDB site
Description: Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P1 form
Class: viral protein
Keywords: SARS-CoV-2, COVID-19, nucleocapsid, RNA binding, VIRAL PROTEIN
Deposited on 2020-05-14, released 2020-05-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-04-07, with a file datestamp of 2021-04-02.
Experiment type: XRAY
Resolution: 1.42 Å
R-factor: N/A
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleoprotein
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6wzoa_
  • Chain 'B':
    Compound: nucleoprotein
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6wzob_
  • Chain 'C':
    Compound: nucleoprotein
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6wzoc_
  • Chain 'D':
    Compound: nucleoprotein
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6wzod_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6wzoA (A:)
snatkksaaeaskkprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpq
iaqfapsasaffgmsrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktf
p

    Sequence, based on observed residues (ATOM records): (download) 
    >6wzoA (A:)
kprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpqiaqfapsasaffg
msrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktfp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6wzoB (B:)
snatkksaaeaskkprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpq
iaqfapsasaffgmsrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktf
p

    Sequence, based on observed residues (ATOM records): (download) 
    >6wzoB (B:)
askkprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpqiaqfapsasa
ffgmsrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktfp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6wzoC (C:)
snatkksaaeaskkprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpq
iaqfapsasaffgmsrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktf
p

    Sequence, based on observed residues (ATOM records): (download) 
    >6wzoC (C:)
kprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpqiaqfapsasaffg
msrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktfp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6wzoD (D:)
snatkksaaeaskkprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpq
iaqfapsasaffgmsrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktf
p

    Sequence, based on observed residues (ATOM records): (download) 
    >6wzoD (D:)
skkprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpqiaqfapsasaf
fgmsrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktfp