PDB entry 6wub

View 6wub on RCSB PDB site
Description: 30s subunit (head) of 70s ribosome enterococcus faecalis multibody refinement
Deposited on 2020-05-04, released 2020-11-04
The last revision was dated 2021-05-19, with a file datestamp of 2021-05-14.
Experiment type: EM
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'a':
    Compound: 16s rRNA
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
  • Chain 'd':
    Compound: 30S ribosomal protein S4
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'e':
    Compound: 30S ribosomal protein S5
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'f':
    Compound: 30S ribosomal protein S6
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'h':
    Compound: 30S ribosomal protein S8
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'k':
    Compound: 30S ribosomal protein S11
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'l':
    Compound: 30S ribosomal protein S12
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'o':
    Compound: 30S ribosomal protein S15
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'p':
    Compound: 30S ribosomal protein S16
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'q':
    Compound: 30S ribosomal protein S17
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 'r':
    Compound: 30S ribosomal protein S18
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):
  • Chain 't':
    Compound: 30S ribosomal protein S20
    Species: Enterococcus faecalis OG1RF [TaxId:474186]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'a':
    No sequence available.

  • Chain 'd':
    Sequence; same for both SEQRES and ATOM records:
    >6wubd (d:)
srytgpswkvsrrlgislsgtgkelarrpykpgqhgpnsrgkvseygmqltekqklrhmy
gmnerqfrtlfikaskikegkhgvnfmvlleqrldnvvyrlglattrrqarqlvnhghit
vdgkrvdipsyhvevgqvigvreksqnistikeaveatvgrpafvsfdteklegsftrlp
erdelypeidealvveyynqk

  • Chain 'e':
    Sequence; same for both SEQRES and ATOM records:
    >6wube (e:)
yidpkhleledrvvainrvtkvvkggrrlrfaalvvvgdknghvgfgtgkaqevpeairk
aiedakknlvevpmvgstiphevigvfgggrilmkpavegsgvaaggpvravlelagvad
itskslgsntpinvvratveglkqlkraeevaalrgksveeii

  • Chain 'f':
    Sequence; same for both SEQRES and ATOM records:
    >6wubf (f:)
qdtkyeimyiirpnideeaktalverfdtilkdngaevieskdwekrrlayemngfregi
yhivnvtspstagainefdrlakinddiirhmivkve

  • Chain 'h':
    Sequence; same for both SEQRES and ATOM records:
    >6wubh (h:)
vmtdpiadfltrirnanmvkhetlevpaskikrdiaeilkregfirdveyieddkqgvir
vflkygkneervitnlkriskpglrayvkadevpkvlnglgiaiistsegvitdkearak
niggeviayvw

  • Chain 'k':
    Sequence; same for both SEQRES and ATOM records:
    >6wubk (k:)
kkniesgvahihstfnntivmitdthgnalawssagslgfkgskkstpfaaqmaaeaatk
vamehglktvdvtvkgpgsgreaairslqatglevtairdvtpvphngcrppkrrrv

  • Chain 'l':
    Sequence; same for both SEQRES and ATOM records:
    >6wubl (l:)
ptinqlvrkprkskveksdspalnkgynsfkktqtnvnspqkrgvctrvgtmtpkkpnsa
lrkyarvrlsnlievtayipgighnlqehsvvllrggrvkdlpgvryhivrgaldtagvn
drkqsrskygtkrpka

  • Chain 'o':
    Sequence; same for both SEQRES and ATOM records:
    >6wubo (o:)
aisqerkneiikeyarhegdtgspevqiavltedinqlneharthkkdhhsyrglmkkig
hrrnllaylrktdiqryreliqrlglrr

  • Chain 'p':
    Sequence; same for both SEQRES and ATOM records:
    >6wubp (p:)
avkirlkrmgskkspfyrivvadsrsprdgrfietvgtynplkdpaevvlkedlvldwls
kgaqpsdtvrnilskegvmkkhheaknvk

  • Chain 'q':
    Sequence; same for both SEQRES and ATOM records:
    >6wubq (q:)
ernqrkvyqgrvvsdkmdktitvvvetkknhpiygkrmkyskkykahdenntakvgdivk
imetrplsatkrfrllevveeav

  • Chain 'r':
    Sequence; same for both SEQRES and ATOM records:
    >6wubr (r:)
kvdyiaanhieyidykdtellkrfisergkilprrvtgtgaknqrkltiaikrarimgll
pfvsde

  • Chain 't':
    Sequence; same for both SEQRES and ATOM records:
    >6wubt (t:)
pniesaikrvrtsananaknssqtnamrtaikkfeeavaagadnvdalyneavkavdmaa
tkglihknkanrdkirlsklak