PDB entry 6wpn

View 6wpn on RCSB PDB site
Description: Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220
Class: transport protein
Keywords: Substrate-binding protein, marine cyanobacteria, sugar-binding protein, transport protein
Deposited on 2020-04-27, released 2021-05-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-05-12, with a file datestamp of 2021-05-07.
Experiment type: XRAY
Resolution: 2.29 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Substrate-binding protein
    Species: Synechococcus sp. [TaxId:1131]
    Gene: 00121
    Database cross-references and differences (RAF-indexed):
    • PDB 6WPN (Start-428)
    Domains in SCOPe 2.08: d6wpna_
  • Chain 'B':
    Compound: Substrate-binding protein
    Species: Synechococcus sp. [TaxId:1131]
    Gene: 00121
    Database cross-references and differences (RAF-indexed):
    • PDB 6WPN (Start-428)
    Domains in SCOPe 2.08: d6wpnb_
  • Heterogens: EDO, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6wpnA (A:)
mgsshhhhhhssglvprgsmrgshmpegtlqlwtlqlapkfnpymddvlgswdklhpeal
vrwtdlpwgsverkllaavfartapdvvnlnppfaanlaskggltdltallppgaeqnyl
psvweaardpeagqiaipwyltvrlslvngdllrqaglsraprrwdevpayarsirertg
ryglfvtvvpddsaellesfvqmgvslldarqraafntpagrkafafwtdlyregllpre
vvsqgqrraielyqsgelallasgaeflrsiqtnapgvaavttpqppltgsdgtanvalm
tlavprqsqqageavelalfltngtnqarfarearvlpsslealsairaeleveqpsnpa
eaqirdarllsaetlntarvlvpatpgvkrlqsiiytqlqramlgqissdqavleaeqqw
nryasarwp

    Sequence, based on observed residues (ATOM records): (download) 
    >6wpnA (A:)
tlqlwtlqlpkfnpymddvlgswdklhpealvrwtdlpsverkllaavfartapdvvnln
ppfaanlaskggltdltallppgaeqnylpsvweaaeagqiaipwyltvrlslvngdllr
qaglsraprrwdevpayarsirertgryglfvtvvpddsaellesfvqmgvslldarqra
afntpagrkafafwtdlyregllprevvsqgqrraielyqsgelallasgaeflrsiqtn
apgvaavttpqppltgsdgtanvalmtlavprqsqqageavelalfltngtnqarfarea
rvlpsslealsairaeleveqpsnpaeaqirdarllsaetlntarvlvpatpgvkrlqsi
iytqlqramlgqissdqavleaeqqwnryasarwp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6wpnB (B:)
mgsshhhhhhssglvprgsmrgshmpegtlqlwtlqlapkfnpymddvlgswdklhpeal
vrwtdlpwgsverkllaavfartapdvvnlnppfaanlaskggltdltallppgaeqnyl
psvweaardpeagqiaipwyltvrlslvngdllrqaglsraprrwdevpayarsirertg
ryglfvtvvpddsaellesfvqmgvslldarqraafntpagrkafafwtdlyregllpre
vvsqgqrraielyqsgelallasgaeflrsiqtnapgvaavttpqppltgsdgtanvalm
tlavprqsqqageavelalfltngtnqarfarearvlpsslealsairaeleveqpsnpa
eaqirdarllsaetlntarvlvpatpgvkrlqsiiytqlqramlgqissdqavleaeqqw
nryasarwp

    Sequence, based on observed residues (ATOM records): (download) 
    >6wpnB (B:)
tlqlwtlqlapkfnpymddvlgswdklhpealvrwtdlpsverkllaavfartapdvvnl
nppfaanlaskggltdltallppgaeqnylpsvweaardpeagqiaipwyltvrlslvng
dllrqaglaprrwdevpayarsirertgryglfvtvvpddsaellesfvqmgvslldarq
raafntpagrkafafwtdlyregllprevvsqgqrraielyqsgelallasgaeflrsiq
tnapgvaavttpqppltggtanvalmtlavprqsqqageavelalfltngtnqarfarea
rvlpsslealsairaeleveqpsnpaeaqirdarllsaetlntarvlvatpgvkrlqsii
ytqlqramlgqissdqavleaeqqwnryasarwp