PDB entry 6wpm
View 6wpm on RCSB PDB site
Description: Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220 in complex with zinc
Class: transport protein
Keywords: Substrate-binding protein, marine cyanobacteria, sugar-binding protein, transport protein
Deposited on
2020-04-27, released
2021-05-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2021-05-12, with a file datestamp of
2021-05-07.
Experiment type: XRAY
Resolution: 2.88 Å
R-factor: N/A
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Substrate-binding protein
Species: Synechococcus sp. [TaxId:1131]
Gene: 00121
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6wpma_ - Heterogens: GOL, EDO, ZN, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6wpmA (A:)
mgsshhhhhhssglvprgsmrgshmpegtlqlwtlqlapkfnpymddvlgswdklhpeal
vrwtdlpwgsverkllaavfartapdvvnlnppfaanlaskggltdltallppgaeqnyl
psvweaardpeagqiaipwyltvrlslvngdllrqaglsraprrwdevpayarsirertg
ryglfvtvvpddsaellesfvqmgvslldarqraafntpagrkafafwtdlyregllpre
vvsqgqrraielyqsgelallasgaeflrsiqtnapgvaavttpqppltgsdgtanvalm
tlavprqsqqageavelalfltngtnqarfarearvlpsslealsairaeleveqpsnpa
eaqirdarllsaetlntarvlvpatpgvkrlqsiiytqlqramlgqissdqavleaeqqw
nryasarwp
Sequence, based on observed residues (ATOM records): (download)
>6wpmA (A:)
tlqlwtlqlapkfnpymddvlgswdklhpealvrwtdlpwgsverkllaavfartapdvv
nlnppfaanlaskggltdltallppgaeqnylpsvweaardpeagqiaipwyltvrlslv
ngdllrqaglsraprrwdevpayarsirertgryglfvtvvpddsaellesfvqmgvsll
darqraafntpagrkafafwtdlyregllprevvsqgqrraielyqsgelallasgaefl
rsiqtnapgvaavttpqppltgsdgtanvalmtlavprqsqqageavelalfltngtnqa
rfarearvlpsslealsairaeleveqpsnpaeaqirdarllsaetlntarvlvpatpgv
krlqsiiytqlqramlgqissdqavleaeqqwnryasarwp